Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02637 ATGGACGAGCCTATTTTAGATGCCATTTGTGAGAAGTTAAGACACAAGATATACATCAAAGGAAGCAATATCTTGTATAATGGTGGTCTAGTGGAGAAGATGGTCTTTGTTATGCATGGGAAATTGGAGAGCATCGAAGGAGAAGATGGAATTAGAATGAGCTTAACCCAAGGGGATGCTTGTGGTGAAGAACTCTTGCAGTGGTGTTTGGAGAATTCATTACTCTACACAGCAAGCAGAAAAATAAGATTTCCAGAAAAAGTCTTACTTAGTGAAAGGACAGTAAGGGCCTTAACAAATGTGGAGGTGTTTTCACTCCGAGCTGATGACCTTGAAGAAGTAATAATTCGTTTCTCAAGATTCTTTCGAAGTCCACGTGTTCAAGCAGCCCTAAGGTCAGTTGTTCCCTTTCTCTCATTATATCTTGATTTTCAGTTCAGCATAATCATCTTCCTTATGACTTAA 465 0.3914 MDEPILDAICEKLRHKIYIKGSNILYNGGLVEKMVFVMHGKLESIEGEDGIRMSLTQGDACGEELLQWCLENSLLYTASRKIRFPEKVLLSERTVRALTNVEVFSLRADDLEEVIIRFSRFFRSPRVQAALRSVVPFLSLYLDFQFSIIIFLMT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02637 154 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 140 - -
Aip05g02637 154 SUPERFAMILY cAMP-binding domain-like 1 122 IPR018490 -
Aip05g02637 154 Gene3D Jelly Rolls 1 120 IPR014710 -
Aip05g02637 154 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 1 140 - -
Aip05g02637 154 CDD CAP_ED 1 115 IPR000595 -
Aip05g02637 154 ProSiteProfiles cAMP/cGMP binding motif profile. 1 66 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02637 Aip-Chr5 124135403 124135956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02637 1 73 Ion Channels AT3G17700 63.014 3.04e-25 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02637 K05391 - ahf:112748967 253.062