Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02636 ATGGCTAACTTCGAAATAGAAGAGGAGCCAATGCTGTCACCTCCACAACGATCTGATGGACTCCGGGGTTCGGATTTTCAGGCCCGAAGCAGGTCTATGCACATTCCCATGGTCTCCCACCGAGAAGCAATTCGTACACTTGATAGTGTGAAAACCTTTCCCCAGAAGAAGAGTGGTTCATCGTCATTCTATTCCACTGCCACTCATGAAACTGTACATCTTTCCTCGTCCCGCCGCGGCGGCACAAGCCAACATTCACCCACGTCTGGCCCACTTAGATGGCATCGTGCTATGACAGGAAGGCTTCAATATAATCCTCTTCGAGCagagTTTGATAGTATTTTTGAGGGTTCTGCTTGGAGAGTCCCTTCATTCTGCTCTTCATGTGTTCCTGGAGTTATACATCCTGACAGTGTAAAACAATGGAACAAGATTATAGCTATTTTAAGCTTGGCGGCAATATTTTTGGATCCATTATTTTTCTTCTTATTGTATGTTGAAAAGCATTTGAATTGCATTGTTATCAGTCGGACAATGACGAGACCACTTGTTTTACTTAGAAGCATAAATGATTTAGTATATTTCATGAACATGCTTCTCCAGTTTAGGTTGGCTTATGTTTCTGCGGGGTCAAGGTTAAGGGGTACTGATTTAATTGACGATCCAAAGAAAATTGCTCGACATTACCTGACTAGTTATTTCTTTCTTGATTTGTTTATTGCACTTCCTCTACCACAGATAATAGTATTGTTTGTGCTGCCAAGATACTTCGGTGCGAGTCATGCTGAGAGTCTTTTATGTGGAGTGATCCTTGTGCAGTATATCCCCAGCATGGACAATTTTGTTATAAATATCCTCATTTTTATACTATCTGGACATGTCGTTGGCTCTTGTTGGTACCTCTTTGGTTTGCAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATAATTCAGTTGTTACTCAATGCATGAAGATTATTGATTGTGGGTATGACCGTTTCTCACACTATACATCATCAGATTCAGAAATGTGGAGAAACAATGCAAATGCAACTGCTTGTTTGAATTCCTCTTCTGGTGCTTTTGATTATGGGATATACGCCAATGTTGTACAACTTACTACGCATCCTAAAATAGTCAAGAAGTATGTGTATGCACTGTATTGGGGCTTCCAACAAATCAGTACTCTTGCTGGTAATCAAACCCCTAGTGATTTTGAGTTCGAAGTCCTTTTCTTAATGGCAATCACAGGAATAGGACTCTTGCTTTTTGCACTTTTGATCGGAAACATACAAAACTATCTTCAAGCTCTCGGTCAGAGGACACTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCAGTTTCACTTACCAGAATATCTTAGAAGGAAAATAAGACATGTTGAACGGTATAATTGGGCTGCAACAATAGGGGTGAATGCAGAAATGCTTATGGAGAATATGCCAGAAGATCTCCAAAGAGACATAAGGCGTCATCTCTTCAGATTCATTAAGAAAGTTTGA 1536 0.4076 MANFEIEEEPMLSPPQRSDGLRGSDFQARSRSMHIPMVSHREAIRTLDSVKTFPQKKSGSSSFYSTATHETVHLSSSRRGGTSQHSPTSGPLRWHRAMTGRLQYNPLRAEFDSIFEGSAWRVPSFCSSCVPGVIHPDSVKQWNKIIAILSLAAIFLDPLFFFLLYVEKHLNCIVISRTMTRPLVLLRSINDLVYFMNMLLQFRLAYVSAGSRLRGTDLIDDPKKIARHYLTSYFFLDLFIALPLPQIIVLFVLPRYFGASHAESLLCGVILVQYIPSMDNFVINILIFILSGHVVGSCWYLFGLQRVNQCLRDACHNSVVTQCMKIIDCGYDRFSHYTSSDSEMWRNNANATACLNSSSGAFDYGIYANVVQLTTHPKIVKKYVYALYWGFQQISTLAGNQTPSDFEFEVLFLMAITGIGLLLFALLIGNIQNYLQALGQRTLEMQLRGRDVEQWMSQFHLPEYLRRKIRHVERYNWAATIGVNAEMLMENMPEDLQRDIRRHLFRFIKKV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02636 511 MobiDBLite consensus disorder prediction 72 93 - -
Aip05g02636 511 SUPERFAMILY cAMP-binding domain-like 440 506 IPR018490 -
Aip05g02636 511 Gene3D Helix hairpin bin 441 505 - -
Aip05g02636 511 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 103 511 - -
Aip05g02636 511 MobiDBLite consensus disorder prediction 1 27 - -
Aip05g02636 511 Pfam Ion transport protein 142 442 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aip05g02636 511 MobiDBLite consensus disorder prediction 72 90 - -
Aip05g02636 511 SUPERFAMILY Voltage-gated potassium channels 139 436 - -
Aip05g02636 511 Gene3D - 143 438 - -
Aip05g02636 511 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 103 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02636 Aip-Chr5 124128045 124135390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02636 74 511 Ion Channels AT3G17700 49.894 6.54e-140 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02636 K05391 - gmx:100785556 503.056