Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02623 ATGGATTGCAACTTTACATTTGCTCTTGAACTAGGGATTGTAACTCCTAGGTTGGAGCCATATTTCAGAGTTGCCAAGTGCCAGGAGGCAAATCCCGGTGTATACACAATCATCACCTTTCCGTTCCTTTTCGCTATCATGTTTGGTGACTGGGGCCATGGCATATGCATATTGCTGGCTTCTTTGTACTTCATAATCAGAGAGAAAAAGTATTCGAGTCAGAAACTTGGAGACATCATGCAAATGGCATTTGGCGAACGCTATATTATTGTGATGATGGCAATCTTCTCAATCTACACTGGCTTCATATACAATGAATTCTTCTCTATCCCGTTTGCTATATTTGCACCATCTGCCTATGCATGCCGTGATCCATCATGCAGGTGGTTGTCAAAAAACAACAGTTTCATTGTGATGATTGCGGAATCTGTAGGGTTGGTGGTCAAGAGAATTATTTCCACTGCGAGAAGTGTGGGTCATGCTATTCAGTTACACTGCGTGACAATCATGTGTGTGGAGAACTCCATAGACATGTGCATTACTGGTTCTGTTATTGCAAttatgtag 567 0.4162 MDCNFTFALELGIVTPRLEPYFRVAKCQEANPGVYTIITFPFLFAIMFGDWGHGICILLASLYFIIREKKYSSQKLGDIMQMAFGERYIIVMMAIFSIYTGFIYNEFFSIPFAIFAPSAYACRDPSCRWLSKNNSFIVMIAESVGLVVKRIISTARSVGHAIQLHCVTIMCVENSIDMCITGSVIAIM 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02623 188 PANTHER VACUOLAR PROTON ATPASES 22 128 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip05g02623 188 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 22 128 - -
Aip05g02623 188 Pfam V-type ATPase 116kDa subunit family 23 123 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02623 Aip-Chr5 123529354 123531668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02623 22 127 Primary Pumps ATPases(2) AT4G39080 77.358 9.85e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02623 K02154 - sind:105172914 193.741