Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02622 ATGGCCACCGCTAGAGTTCATCTCCTTTCTGCTTCTGCCATAAAGCCATTGAGATCGAGCCAAGGCATCTCTTTCACCAACGCGTTTCCAAATCTAATCGCAACGCCCAAGCCTTTGAGATCGAGAGAAAGTACCTCTTCGGTCAACTCTCCTCCACCAATGACGCTCATGTTCTCCATCGGCATTCTATCCCTTGTGTACGCTCTTCTTTCCATTCGTTCTCAGTTTCTGGTTGATAAAAATGTATTTGTTGTATTTTATTCTGGGGAGAGAGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGCTATCCTTTCTCAGATGACCTGGGAAAACAATTTCAGATGATAAGAGAGGTGTCAGGAAAACTTTCAGAGTTGAAGACTACCATCGATGTAGGATTGCTTCATTGGAACACTTTACTCTAG 441 0.4218 MATARVHLLSASAIKPLRSSQGISFTNAFPNLIATPKPLRSRESTSSVNSPPPMTLMFSIGILSLVYALLSIRSQFLVDKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLGKQFQMIREVSGKLSELKTTIDVGLLHWNTLL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02622 146 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 74 146 - -
Aip05g02622 146 PANTHER VACUOLAR PROTON ATPASES 74 146 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip05g02622 146 Pfam V-type ATPase 116kDa subunit family 75 139 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02622 Aip-Chr5 123527531 123528988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02622 79 146 Primary Pumps ATPases(2) AT4G39080 80.882 1.56e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02622 K02154 - gmx:100805813 123.635