Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02615 ATGACAGCTTATGAAAGATCGCGAATACTATTTCGCTTCGCTGATTTATTGGAGAAACACAATGATGAAGTTGCAGCAATTGAAGCATGGGACAGTGGAAAGCCTTATGAACAAGCTGCAAATGTTGAAATTCCTATGGTGGTTCGAGTGTTTCGATATTATGCAGGTTGGGCAGATAAAATTCATGGGCTAACTATTCCAGCTGATGGACAGCACCATGTGCAGACCTTGCATGAGCCTATCGGTGTAACAGGGCAGATTGTTCCATGGAATTTCCCGCTTCTTATTTATTCGTGGAAGGTTGCGCCCGCGTTAGCCTGTGGTAACACGGTTGTATTGAAAACTGCAGAGCAGACACCACTCTCAGCCCTCTATGTATCAAAATTATTACTTGAGGTAGGACTTCCTCCTGGTGTACTAAACATCATCTCCGGCTTCGGTCCGACTGCCGGTGCAGCTCTATGTAGTCACATGAATGTTGACAAGGTTGCTTTCACAGGATCCACCGGCACTGGTAAGATTGTTCTAGGACTTTCTGCACAAAGCAATCTGAAGCCAGTAACACTGGAGCTTGGTGGAAAATCTCCCTTCATTGTTTGTAGCGACGCTGATATTGATGTGGCTGTTGAGGCCGCTCATTCTGCTTTGTTCTTTAACCAGGGCCAATGTTGTTGTGCTGGTTCTCGCACATTTGTACATGAAAGCATATATGATGAATTCGTGGAAAAATCGAAAGCTCGCGCCCTCAAACGTGTAGTAGGAGACCCTTTCAGAAGAGGGGTTGAGCAAGGTCCTCAGATTGATTCTGTGCAATTTGAGAAGATCCTAAAATACATTAGATCAGGAATTGAAGATGGTGCTAAACTTGAGTCTGGTGGTGAAAGATTTGGCTCCAAAGGCTACTATATCAAACCCACTGTTTTCTCCAATGTTCAGGACAACATGTTGATAGCAAAAGATGAGATCTTTGGTCCAGTACAAACAATCTTGAAATTTAGGGATATAGAGGAAGTGGTACAGAGGGCAAATTCAACTTCTTATGGCCTTGCTGCTGGAGTCTTTACAAAGTCCATAGACACTGCTAACACATTGATGCGCGCGTTGCGAGTTGGGACAGTTTGGATCAACTGTTATGATGTCTTCGATGCGGCAATACCTTTCGGCGGATACAAGATGAGTGGACAAGGGAGAGTGAGAGGAATCTATGGCCTTAGCAGCTACCTTCAAGTTAAAGCTGTTGTCAATCCTTTGAAGAATCCAGCATGGTTGTAG 1272 0.4434 MTAYERSRILFRFADLLEKHNDEVAAIEAWDSGKPYEQAANVEIPMVVRVFRYYAGWADKIHGLTIPADGQHHVQTLHEPIGVTGQIVPWNFPLLIYSWKVAPALACGNTVVLKTAEQTPLSALYVSKLLLEVGLPPGVLNIISGFGPTAGAALCSHMNVDKVAFTGSTGTGKIVLGLSAQSNLKPVTLELGGKSPFIVCSDADIDVAVEAAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKSKARALKRVVGDPFRRGVEQGPQIDSVQFEKILKYIRSGIEDGAKLESGGERFGSKGYYIKPTVFSNVQDNMLIAKDEIFGPVQTILKFRDIEEVVQRANSTSYGLAAGVFTKSIDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYGLSSYLQVKAVVNPLKNPAWL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02615 423 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 217 228 IPR016160 GO:0016491
Aip05g02615 423 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 423 - -
Aip05g02615 423 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 189 196 IPR029510 GO:0016491
Aip05g02615 423 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 195 384 IPR016163 GO:0016620
Aip05g02615 423 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 1 423 - -
Aip05g02615 423 Pfam Aldehyde dehydrogenase family 1 413 IPR015590 GO:0016491
Aip05g02615 423 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 413 IPR016162 GO:0016491
Aip05g02615 423 SUPERFAMILY ALDH-like 1 416 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02615 Aip-Chr5 123395068 123398468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02615 1 423 Aldehyde Dehydrogenase Gene Family AT3G48000 75.887 0.0 709