Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02614 ATGTTTCGTCTAGCGCTGCGCCTCCCTCTCCTCAGTCCTCACTGTCCACCATCGTCCGTCCTCTGCGACGCCACGACGGTGGCTGGACAGTTCCCTCACCTAACTACTCCTCGTGGTTCTTCGCCTCCACCACCGTCCATTCGTCCACTCCTCTCTTCCTCGGTTACGCTGAAGGCTGAAGGTGCCTCACTACTACTCGTGGTTCATCGCCGATCGCCGCTCGCCGCTCGCCACCTCGTTCTTCCGCACTCCGGAGAACTCGACGCTTCACGGGTTCCGGTCGCCTGGTTGCCTGAGCTGCCTCTCTTCTTCTTCGCTTCTACCTCAGCTTCCTTCGACAAGGTTTCAACAATGGTTAGAAAAAAGGCAGAAGATGCAGGCCCATCAGCAAAGACTAAGGCAGGTAGCAAAGATGTCCCTAAGAAGGAAAAAGTTTCCATTTCTGCCATGCTGGCCAGCATGGATGAAAAGCCTGATAAACCCAAAAAGCCCTCTTCCATTAAACCCAAGGCAAAAGCTGCTCCAAAACCTTCTGCATATACTGATGGTATTGATCTTCCTCCATCTGACGAAGATGAAGATGAAGCTCTCTTGGAGGAGGAGGAAGAGAATGCCTCCAAACGGCAGCAGAGGAGTGAGTTGAAGACACTTGAAATTTCAACCACAGACAAAGAGCTGAAGAAGCGTGAGAAGAAGGATATTTTAGCAGCTCATGCTGTTGAGCAGGCAAAGAAGGAAGCTCTTAAGGATGATCATGATGCTTTCACTGTGGTCATTGGAAGTCGGACTTCAGTGCTTGATGGAGATGATGATGCTGATGCTAATGTCAAAGATATAACAATAGAGAATTTCTCGGTGTCTGCTCGGGGTAAAGAACTTCTGAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGACCCAATGGAAAGGGGAAGTCCACACTATTGAAGCTTCTTTCTTGGAGGAAGATACCAGTACCTAAGAATATTGATGTCCTTCTGGTTGAGCAAGAGGTAGTAGGTGATGATAAAACAGCACTAGAAGCTGTTGTGTCAGCTAATGAAGAACTGGTTAAAGTTCGACAAGAAGTTGCTTCTCTGCAAAATGCAGCTTCTGCAGAAGGAAGTGTTGACAATGAGGAAGATGATGCGGGAGAGAAGCTAGCAGAGCTGTACGAGAAACTACAGCTGATGGGTTCTGATGCTGCTGAAGCTCAAGCATCAAAGATTTTAGCGGGTTTGGGTTTTACAAAGGATATGCAGGGCCGGCCAACAAAATCTTTCAGTGGTGGATGGAGAATGAGGATTTCTTTAGCTCGAGCACTTTTTGTGGTGCCGACTTTGTTATTGCTTGATGAACCCACAAATCACCTTGACTTGAGGGCTGTTCTCTGGCTGGAAGAGTACCTGTGCCGTTGGAAGAAGACTTTGGTTGTTGTTTCACATGATAGGGATTTCCTCAATACAGTTTGCACTGAGATTATTCATCTTCATGACTTGAAACTCCATTTCTACCGTGGAAACTTTGATGACTTTGAGAGTGGGTATGAACAGCGTCGTAAAGAGATGAACAAGAAGTATGAGATTTATGACAAGCAACTAAAAGCTGCAAAAAGGAGTGGTAATCGAGCTCAGCAAGAAAAGGTGAAGGATCGAGCGAAGTTTGTGGCAGCTAAAGAAGCATCTAAAGCCAAGGGAAAGGGCAAGGGCAAGGTTGATGAAGATGAGGCCCCACCAGAGGTTCCACAGAAGTGGAGGGACTACAGTGTTGAATTTCACTTCCCTGAACCTACCGAGCTCACGCCTCCACTTCTTCAGCTTATTGAAGTGAGCTTCAGTTATCCAAACCGTGAGGACTTCAGACTGTCAAATGTTGATGTTGGCATTGATATGGGAACTCGTGTTGCCATTGTTGGGCCTAATGGAGCTGGAAAATCTACACTACTGAACCTTCTGGCTGGTGATTTGGTTCCAACTGAGGGTGAAGTTAGGAGAAGTCAGAAGTTGCGAATAGGAAGATACTCGCAACACTTTGTGGACCTTCTAACTATGGACGAAACCCCCGTTCAGTATCTTCTTCGTCTCCACCCAGACCAGGAGGGACTTAGCAAGCAAGAGGCCGTCCGTGCAAAACTCGGTAAGTTTGGGCTACCTAGTCATAACCATCTCACCCCTATTGCCAAACTATCAGGAGGGCAGAAGGCTAGGGTGGTATTTACCTCAATATCCATGTCAAGACCCCATATTTTGTTGTTGGATGAACCCACTAATCATCTAGACATGCAAAGCATTGATGCGTTGGCTGATGCACTAGACGAGTTCACTGGTGGAGTTGTTCTTGTTAGTCATGACTCGAGATTGATATCACGTGTATGTGAGGATGAAGAAAGGAGTCAGATCTGGGTTGTCGAGGATGGTACTGTCAGGACTTCAATTGGAACATTCGATGATTACAAGGACGAGTTGATGAAAGAAATCAAAGCTGAAGTTGATGACTAA 2514 0.4674 MFRLALRLPLLSPHCPPSSVLCDATTVAGQFPHLTTPRGSSPPPPSIRPLLSSSVTLKAEGASLLLVVHRRSPLAARHLVLPHSGELDASRVPVAWLPELPLFFFASTSASFDKVSTMVRKKAEDAGPSAKTKAGSKDVPKKEKVSISAMLASMDEKPDKPKKPSSIKPKAKAAPKPSAYTDGIDLPPSDEDEDEALLEEEEENASKRQQRSELKTLEISTTDKELKKREKKDILAAHAVEQAKKEALKDDHDAFTVVIGSRTSVLDGDDDADANVKDITIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLSWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKVRQEVASLQNAASAEGSVDNEEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVVPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKYEIYDKQLKAAKRSGNRAQQEKVKDRAKFVAAKEASKAKGKGKGKVDEDEAPPEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVRTSIGTFDDYKDELMKEIKAEVDD 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02614 837 CDD ABCF_EF-3 610 812 - -
Aip05g02614 837 ProSitePatterns ABC transporters family signature. 433 447 IPR017871 GO:0005524
Aip05g02614 837 Gene3D - 576 837 IPR027417 -
Aip05g02614 837 PANTHER - 122 837 - -
Aip05g02614 837 Coils Coil 355 375 - -
Aip05g02614 837 MobiDBLite consensus disorder prediction 186 200 - -
Aip05g02614 837 Pfam ABC transporter 627 762 IPR003439 GO:0005524
Aip05g02614 837 MobiDBLite consensus disorder prediction 564 585 - -
Aip05g02614 837 Coils Coil 525 545 - -
Aip05g02614 837 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 279 536 IPR003439 GO:0005524
Aip05g02614 837 MobiDBLite consensus disorder prediction 201 216 - -
Aip05g02614 837 CDD ABCF_EF-3 279 506 - -
Aip05g02614 837 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 610 835 IPR003439 GO:0005524
Aip05g02614 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 589 819 IPR027417 -
Aip05g02614 837 MobiDBLite consensus disorder prediction 123 216 - -
Aip05g02614 837 Pfam ABC transporter 294 461 IPR003439 GO:0005524
Aip05g02614 837 Gene3D - 276 557 IPR027417 -
Aip05g02614 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 513 IPR027417 -
Aip05g02614 837 SMART AAA_5 303 505 IPR003593 -
Aip05g02614 837 SMART AAA_5 636 812 IPR003593 -
Aip05g02614 837 Coils Coil 197 217 - -
Aip05g02614 837 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 122 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02614 Aip-Chr5 123322020 123326452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02614 609 822 Calmodulin-binding Proteins AT2G36910 29.583 8.55e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02614 K06184 - gmx:100806226 1191.02