Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02604 ATGGCAAGAAGATGGTCCTTCTACAAGAATCTGCTTCCAATCTTGTTACTTATTGGTATAGAGTGCAATGATATGGGGTTACTCACTTTGTTCAAAGCAGCCACCAATAAAGGCATGAGCAACCATGTGTTTGTTGCATATGCTTATGCTATTGCTACTATTGTTCTTATTCCTGCACCTTTCATCTCCAAAAGATCAAGAGTGGTTCCTCCACTCAGTTTCTCCATACTTTCCAAAATTGTCCTTCTTGGGATCATAGGAAGTTCATCTCAAATTCTGGGGTATGCTGGAATTAGTTACAGTTCTCCAACACTTGCTTCATCAATTGGCAACTTGGTTCCTGCTTTCACCTTCTTGCTTGCAGTCTTTTTCAGGATGGAAAAGATGGATGTAAAAAGTAGAATTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGAGCATTTGTGTTGACTTTCTACAAAGGTCCATCTATCAGCAACAATTCTCATACCAAAATTACCTCATTGCCCCTGCTTCAACAACCAATTAACCTTCCCAGAGCAGTGGACACAAATTGGGTCCTTGCTGGAATTCTTCTAACAGCTGATTATTTACTTTTTTCAATATGGTACATTTTACAGGTGGATGTATTGAAGGATTACCCAGATGAACTAAGTATGCTCTTCTTTTACAACGTGACTTCAACCATCATATCTACAATTGTAGGTTCAATTTTAGAGCCTAATGCAAGTGCTTGGAAGATAAGGCTAGACATTTCATTGGTCTCAATTCTTTGCTCAGGTTTACTTGGAAAGTTCTTGAGCAATGCAATTTATGCTTGGGTGATGCACATAAAAGGACCAGTTTTTGTAACAGCATTCAAGCCACTATCAATTGTTATTTCTGTTGCCATGGGAGTCATGTTCCTAGGTGACACTCTTTATATTGGAAGTATAATTGGGGCTACAATAATATCAATTGGACTCTACACTGTATTGTGGGGCAAATCAAAAGAAGAGGCAGAGGAAGATGTTATTGGTAGCCTAGAATCACTAACTAGTGAGAATGTTCCATTCTTGCATAGCTACAACACTTCATACTCTGAAAAGAAAACAGACACAAATTAA 1116 0.3826 MARRWSFYKNLLPILLLIGIECNDMGLLTLFKAATNKGMSNHVFVAYAYAIATIVLIPAPFISKRSRVVPPLSFSILSKIVLLGIIGSSSQILGYAGISYSSPTLASSIGNLVPAFTFLLAVFFRMEKMDVKSRISQAKVMGSIISIAGAFVLTFYKGPSISNNSHTKITSLPLLQQPINLPRAVDTNWVLAGILLTADYLLFSIWYILQVDVLKDYPDELSMLFFYNVTSTIISTIVGSILEPNASAWKIRLDISLVSILCSGLLGKFLSNAIYAWVMHIKGPVFVTAFKPLSIVISVAMGVMFLGDTLYIGSIIGATIISIGLYTVLWGKSKEEAEEDVIGSLESLTSENVPFLHSYNTSYSEKKTDTN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02604 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 334 - -
Aip05g02604 371 PANTHER WAT1-RELATED PROTEIN 5 358 - -
Aip05g02604 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Aip05g02604 371 PANTHER WAT1-RELATED PROTEIN 5 358 IPR030184 GO:0016021|GO:0022857
Aip05g02604 371 Pfam EamA-like transporter family 28 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02604 Aip-Chr5 123041012 123049815 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02604 1 360 Nodulin-like Gene Family AT3G28050 48.925 7.87e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02604 - - gmx:100790743 494.967