Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02588 ATGCATGGGTCCGGTTCTGAGGAGTGGAAACACAGCCGGCACATGTGGCCCAACGCCACTGCTGTAGCCCCCGATTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTTATGTTGGTGATTGTGCACTTTTCAAGCCACCCCGGCATTCCCCACCTTTTATTGGAATAATTCGCAAGTTAATATTTAATAAAGAAGAAAGTCCAACTTTAGAAGTGAATTGGCTTTACCGACATGCTGATGTGAAGCTTACCAAGGGCGTATTGGAAGCTGCCCCAAACGAAGTCTTCTACTCATATCACAAGAATGAAATATCTGCTTCATCATTACTCCATCCGTGTAAAGTCGCGTTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCTGCGTTTGTCTGCAGGCGAGTGTATGACACTGAGAACAACTGTATATGGTGGCTAACCGATAAGGAATACATTAATGCTGTACCGGAAGAAGTTGACCGGTTATTAGACAAGACAAAACTAGAAATGCATGGGGCAGCGCAGTCGGGAGGCCGTTCTCCAAAACCTTTGAATGGTCCGACATCAACACAATCTTTGAAATCTGGTTCTGATAGTGTTCAAAACAGTTCTTCCTTTGGTACACAGGTTAAAGGAAAAAAGAGAGAAAGGGGTGATCAGGGTTCTGATTTATCTAAACGAGAGCGGCTATTTAAAGCAGAAGATGGGGATTTTGGCCCAGTTAGATCTGAGAGCATGTTGAGGAGTGAGATCAGTAAAATTACTGACAAAGGTGGGCTTGTTGACTTTGAAGGAGTTGAAAGACTTGTGCAACTCATGCAACCTGATGGTGCTGATAAAAAAATAGATTTGGGTGGGAGAATAATCCTTGTTAATGCAATAGCAGCAACCGAGCGTGATGATTGTCTTAGCTGGTTTGTACAGCTCAGGGGTTTACCTGTGTTGGATGAATGGCTCCAGGAGGTTCACAAGGGAAAAAATGGTGATAGTAATACCCCTAAAGAAAGCGACAAATCAGTTGAGGAATTTTTGTTAGCCTTACTTCGTGCATTGGATAGGCTTCCTGTGAACCTTCATGCATTGCAAACATGCAATGTTGGGAAGTCTGTTAATCATTTACGCACTCACAAAAATTCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTAGATACATGGAAGAAACGTGTTGAGGCTGAAATGAATATGACCGATTCGAAATCTGGTTCTACACGTCCTGTGTCTTGGCAAGCAAAACCGGCAGCTTCTGAGATCTCTCATGTTGGAAATAAGAAAACTGGAGGATCTGAGAATGCTACAAAGGGATCTGCAATTCAATCATCAGTATCCAAAAATTCATTGGCTAAGCATGGTTCTGGGGAAGCATTGTCCAAGTCTTCTTCAGCTCCTAGCTCAATTAAATTGATGACTACCTCAATGGGCTGTACCCCTAAAGATCAGAATGTGAAGGCATTAGTTGGTGCCCCAGCATCAGATCAACCTCTGACACCTATCAAGGAGGAAAGGAGCAGCAGTTCTAGTCAGTCCCAAAACAACAGCTTATCTTGTTCTAGTGAACATGCAAAAACAATTGGGTCTTGTAGGGAAGATTCTAGGAGTTCCACTGCTGTGTCAATGAGTGCGAGCAAAATACCTGGTGGTACATCTCGAACTCGGAAGTCAAGCAATGGAGTACATGGGGCTGGTGTTGCACTTGCTCAGAAGGAGCCCACCTCGGTAAAAAGCTCTACTAGAAACTCACCTTCTGAAAAAGTTTCACCAACTCGAGTTTCCCACGAAAAATCTTTTGATCCGCCACTTACCGATCAAGGGAATAATCAACGCCTTATTCTCAGACTGCCAAATACTGCCCGTAGTCCTTCAAGGGGAGCAAGCGGTGCTGCTTCTGAAGAACCTGCTATTCCTTGTGGCATAGCTTCGCCTCCTGCCGACAAGAATGAGTCTCGGGATAGAAGAGTTAAAGCCAAAAATGATGGTTTGCATACCATTGTTTCATCTAATGTGATAACTGATGCCTGTGCTTCTAATGAAGCTTCAACTGGCTGTGAGCATGGTAAGGGCTCTCCGATAGCTGATGAACAGGGAAGGATTAATGAAGACGGTGATCAGGTACCAGAAACATCGAAACAGAGTAATCTGTCATCAGGATTTATTTCCAGATCAGGGCAGACTTATGCTGCTTCTTTAAGCCCTATGAATGCATTAGTTGAAAGTTGTGTCAAATTCTCCGAAGCTAGTGCCTCTGTCTCTGCTGGTGATGATGGGATGAACTTACTTGCTACCGTAGCTGCAGGCGAGATATCCACATCTGGAAATGTCTCTCCTCTGGCTTCACCTGAGAGGAAGTCTCCTGTGGTAGATGAATCCAGCTCTGGCAATGTTTCCAAGTTAAAGCATCCGGGTGAAATAGCTGCTCACACTGTTACACAATCTGATAGAAGGGCATCAGCAGAGCCTCAGTTGAATGCTGTTGATCCAGTGCAATTTAAAAATGATTCAAGGCACCCTATGACCACAATATCACGTGGTTCTGCTGGAGAAGAAGCAATTTCAACCAGTTGTAAAGAGAAAACTGGTGATGACGGGGCCCAAATGAATGTCTCTACTGCAGATTTGTCACAAAATGCTGAATCTCCTTGCATACGGCCAGAAATTGCTGAGAGTGCTTCTGAAACTGTACCACCATCTAAAAAGGAGACTCGGGAAGAGCCTGGAGGAGAGAACTATTTTCATGTGCAGAGGGATTTTGGAAGTCAGTGGGTTAAACCCAGCAGTTCAGACTCTAAAAAGGAGATGGTTGATCACTTGGATGAGGCAATCGTGAAGAATGATGAAATGCTAGTTTCCAAAGAGACCATTGCAGGTGTAAAGATTGAAACGGAATTAGGTGAAAAATTACTTAAGTTATCTTCAGATGTAGGTAAGGATAACAAGATCAGTACAGAGGTTACTGGCGTATCAGTGCAAAAGTCATCTGTTGCAGAAAGCAGCGAGTCTGTAGAGTTTAAAAAGGTGGATGTGATGCCGCCTTCTGCTTCTGGTAATTCTTTGATGGCATCCAGGGATGAAAATGCAAATGAGATGAAGCTGGCTGCCACCAATCCTGATGAAAAANGGTGTGACAAAGATAATTCAGGTCTGAAGGAGATTCTTGGTCAATGTTCTGGATCATCAAATCTCCCAGCGTTGTCCAAAGTTCCCGGGAAAGAAAATGAAGTGTCTAAAACTTCTGTGTGCAACTTAGATGGAAAGGAATCTGATGTTGCAGGTGAGCAGCATGCCCACAGTATTCATCCATCCCTCACTGTTGCTGGGTCTGATGCAGGTGTAATATTAGACTTTGATCTAAATGAGGGCTTCTCTGTTGATGATGCTAGCCATGGGGAGATTGTTCGGCAGGAAGAACACACCACATCATCTGCGGTCCATAATCCTTGTGCATTGCCTTTTCCCATTTCATCCATCTCTGGGGGATTCCATACAACAATTACAGTGGCATCTGCTGTCAAGGGGCGAGTTGTTCTACCAGAAAACCCATTGCGCAGTAAGGGTGAACTTGGATGGAAAGGCTCTGCTGCAACAAGTGCCTTCCGGCCAGCTGAACCTAGGAAAAATTCAGAGACACCGTCAACTACTGGAGATATTCCTTCTGTTGATTCCACATCTTCAAAACAAGGCCGTGCTCCTTTAGATTTTGATTTGAATGTTGCTGATGAAAGAAGTTTTGAGGATGTAGGTTCCCATGGTTCTTCAGAATCTGGGCCACCTGATCGCAGCACAATGGGACTTGATCTTGATTTGAACAGAGTTGATGAGACTCCTGATGCTGTTTCTTACTCTCTGAGTAAACTGGATGCTCCTACATTGCCAAGTAAGCCTTCACTGTCTGGTAGGTTATCTAATGGTGGAAGTGTGTCAAGAGACTTCGATTTGAATAATGGACCAGGCCTTGATGAAGTTGGCACAGAGGTCCCAACTCGAATTCAGCAGATGAAAAATAGTGCACCGATTCCATCTGCCATCCATGGTACAAGAGCCAACAATGCTGAATATGGGAATTATTCATCATGGTTTCCCCCAGGAAATTCTTATTCTGCAATTACTGTCCCTCCACTTCTTCCTGGTAGAGGTGAACAGAGTTATGTTGCAGCTGCTGGTGCACAGCGGATAATGGGTCCCACTGGTAGTGCAGCCTTTGGTCCTGAACTCTACCGGGGGCCAGTGCTTTCATCTGCTCCTGCTGTTGCTTACCAACCTACTGCAGCACCCTTTCCATATCCAGGAGGATTTCCATTTGAGACTAGTTTTCCATTATCTTCAAACTCCTTTTCTGTTGGTTCAGCAACATTTATTGATTCATCAACAGTTGGTGGACTTTGCTTTCCTACTATGCCGTCGCAGCCAGTTGCACCTGGTGGTGTTGTCTCCTCAACATATCCGCGTCCATATGTCATGAGTCTTCCTGGGGGTACAAGTAATGTGATTCCTGACACCCGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCCGGTGGTACAGATACAGACAGGAGAGAGGAACATATGAAGATGTTTCAGGTGGCAGGTGTCTTGAAGAGAAAAGAACCTGATGGTGGTTGGGATGGAGCTGATAGATTCAGCTACAAACAGCCCTCATGGCAGTAG 4701 0.4452 MHGSGSEEWKHSRHMWPNATAVAPDSSPSQFICKDGRKIYVGDCALFKPPRHSPPFIGIIRKLIFNKEESPTLEVNWLYRHADVKLTKGVLEAAPNEVFYSYHKNEISASSLLHPCKVAFLRKGVELPSGISAFVCRRVYDTENNCIWWLTDKEYINAVPEEVDRLLDKTKLEMHGAAQSGGRSPKPLNGPTSTQSLKSGSDSVQNSSSFGTQVKGKKRERGDQGSDLSKRERLFKAEDGDFGPVRSESMLRSEISKITDKGGLVDFEGVERLVQLMQPDGADKKIDLGGRIILVNAIAATERDDCLSWFVQLRGLPVLDEWLQEVHKGKNGDSNTPKESDKSVEEFLLALLRALDRLPVNLHALQTCNVGKSVNHLRTHKNSEIQRKARSLVDTWKKRVEAEMNMTDSKSGSTRPVSWQAKPAASEISHVGNKKTGGSENATKGSAIQSSVSKNSLAKHGSGEALSKSSSAPSSIKLMTTSMGCTPKDQNVKALVGAPASDQPLTPIKEERSSSSSQSQNNSLSCSSEHAKTIGSCREDSRSSTAVSMSASKIPGGTSRTRKSSNGVHGAGVALAQKEPTSVKSSTRNSPSEKVSPTRVSHEKSFDPPLTDQGNNQRLILRLPNTARSPSRGASGAASEEPAIPCGIASPPADKNESRDRRVKAKNDGLHTIVSSNVITDACASNEASTGCEHGKGSPIADEQGRINEDGDQVPETSKQSNLSSGFISRSGQTYAASLSPMNALVESCVKFSEASASVSAGDDGMNLLATVAAGEISTSGNVSPLASPERKSPVVDESSSGNVSKLKHPGEIAAHTVTQSDRRASAEPQLNAVDPVQFKNDSRHPMTTISRGSAGEEAISTSCKEKTGDDGAQMNVSTADLSQNAESPCIRPEIAESASETVPPSKKETREEPGGENYFHVQRDFGSQWVKPSSSDSKKEMVDHLDEAIVKNDEMLVSKETIAGVKIETELGEKLLKLSSDVGKDNKISTEVTGVSVQKSSVAESSESVEFKKVDVMPPSASGNSLMASRDENANEMKLAATNPDEKXCDKDNSGLKEILGQCSGSSNLPALSKVPGKENEVSKTSVCNLDGKESDVAGEQHAHSIHPSLTVAGSDAGVILDFDLNEGFSVDDASHGEIVRQEEHTTSSAVHNPCALPFPISSISGGFHTTITVASAVKGRVVLPENPLRSKGELGWKGSAATSAFRPAEPRKNSETPSTTGDIPSVDSTSSKQGRAPLDFDLNVADERSFEDVGSHGSSESGPPDRSTMGLDLDLNRVDETPDAVSYSLSKLDAPTLPSKPSLSGRLSNGGSVSRDFDLNNGPGLDEVGTEVPTRIQQMKNSAPIPSAIHGTRANNAEYGNYSSWFPPGNSYSAITVPPLLPGRGEQSYVAAAGAQRIMGPTGSAAFGPELYRGPVLSSAPAVAYQPTAAPFPYPGGFPFETSFPLSSNSFSVGSATFIDSSTVGGLCFPTMPSQPVAPGGVVSSTYPRPYVMSLPGGTSNVIPDTRKWGSQSLDLNSGPGGTDTDRREEHMKMFQVAGVLKRKEPDGGWDGADRFSYKQPSWQ 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02588 1566 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 270 404 IPR035441 -
Aip05g02588 1566 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1566 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 1294 1331 - -
Aip05g02588 1566 SMART TFS2_5 323 402 IPR003617 GO:0005634
Aip05g02588 1566 MobiDBLite consensus disorder prediction 1214 1238 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 867 886 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 654 668 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 608 633 - -
Aip05g02588 1566 Pfam BAH domain 38 144 IPR001025 GO:0003682
Aip05g02588 1566 MobiDBLite consensus disorder prediction 904 919 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 842 858 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 170 233 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 840 939 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 1545 1566 - -
Aip05g02588 1566 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1566 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 699 713 - -
Aip05g02588 1566 Gene3D - 21 235 IPR043151 -
Aip05g02588 1566 CDD TFIIS_I 359 401 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 214 233 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 185 213 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 403 669 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 507 566 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 1508 1532 - -
Aip05g02588 1566 ProSiteProfiles TFIIS N-terminal domain profile. 324 403 IPR017923 -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 1508 1522 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 406 420 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 687 727 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 779 807 - -
Aip05g02588 1566 Pfam TFIIS helical bundle-like domain 351 400 IPR017923 -
Aip05g02588 1566 ProSiteProfiles BAH domain profile. 37 151 IPR001025 GO:0003682
Aip05g02588 1566 MobiDBLite consensus disorder prediction 1190 1281 - -
Aip05g02588 1566 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 306 413 IPR035441 -
Aip05g02588 1566 SMART BAH_4 37 151 IPR001025 GO:0003682
Aip05g02588 1566 MobiDBLite consensus disorder prediction 1294 1318 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 579 596 - -
Aip05g02588 1566 MobiDBLite consensus disorder prediction 432 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02588 Aip-Chr5 122578786 122587216 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aip05g02588 BAH 6.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02588 - - ahf:112750750 2383.99