Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02563 ATGGATCAAATTCCAACTTATCCAAACACCACCTCAATTACTGGAATAACAATCCTTTCTCTTGTTATTACCATCTTATTCTATTTATTAATGTATCGTCCATTCAAAGCTGGCAATAAACATAGAGAACCTCCAATGGTGGCTGGTGCATGGCCTATACTGGGTCACCTTCCACTCTTCCATGGCTCACGTTCACAGCCACTCCACATTACTTTAGGCGCCATGGCTGACAAATATGGACCCCTTTTCACCGTGAAGCTTGGTTCCAAAAAGATTGTAGTACTAAGCAACTCAGAAATGGCGAAAGAATGCTTCACAAAGAATGATGCAATTGTTGCTTCTCGTCCCAATCTTGTCTCATTCGAAAACCTTGGCTACAATGGAGCCATGATTGGTTTCACGCCGTACGGTCCATATTGGCGTGAACTCCGCAAGTTTTCAACCTTAGAGCTTCTCTCGAATCGCCGCATAGAGCTGCTAAGCCATGTTCGTGTCTCCGAAGTTCGAGCTTCAACAAAAGATCTCTTAAGTCTTTGGTCCACTCAGAAGAATGAATCTGGATACGTGTTGGTGGACGTAAAGCAATGGTTTGCAGAATTGACATTCAACATGGTTCTTAGAATAGTTGCGGGGAAGACATTCTTTGGAGCTGTAGATTCGGAGAGTGAGGATAAAGCGAGTAAGTGTTTAAAGACTATTAGGGAGATGATGCGTCTTATGGGGCTGTTTACTGTGGGAGATGCTATTCCTTCATTAAGGTGGCTTGATTTGGGGGGGCATGAGAAGGCCATGAAAGAAACTGCTAAACAACTCGATGAGATTTTGAGTGGATGGTTGGATGAGCATCGCAAAAACATGGATTTGTTAAGTGAAGAGCCACGTGACTTCATTGATGTCATGCTTTCGGTGTTTTCTCATACCAACATTCATGGGTTTGATGCTGACACCATATATAAAGCCACAATATTGACAATGATAGTTGGGGGAAATGACACCACCACAGTTTCTCTTACATGGGCCATGTGTTTGCTATTGAAAAATCCTCACGTGTTGGAAAAGGCAAAACAAGAACTTGATGAGAAAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGAGTCAGATATAAATAATTTAGTATATCTTCAAGCTATAGTCAAGGAAACATTAAGATTGTATCCAGCAGCTCCTCTAGCAGCACCTCATGAATTCACAGAAGATTGCAATTTAGGTGGATATCACATCAAAAAGGGAACTCAGCTAATTACAAATATTTGGAAAATCAATACCGATCCTTATATTTGGTCAGATCACTTGGACTTCAAGCCAGAAAAATTCCTCACAACCCACAAAGATATCGACGTTAAAGGCCATCACTTTGAATTGTTACCGTTTGGAGGTGGCAGACGTATTTGTCCCGGAATTTCATTTGGCCTTAAAATGCTTCACTTTGTTTTGGCGAGCTTTTTGCATTCCTTTGAAATATTGAACCCACCTATTGAATTTGTTGATATGAGTGCAACTCTTGGATTGGTCATTGCTAAAACTACTCCACTTAAGATCATGGTTAAACCACGTTTATCTCCCAACTGTTATGTAAACATGTAA 1734 0.372 MDQIPTYPNTTSITGITILSLVITILFYLLMYRPFKAGNKHREPPMVAGAWPILGHLPLFHGSRSQPLHITLGAMADKYGPLFTVKLGSKKIVVLSNSEMAKECFTKNDAIVASRPNLVSFENLGYNGAMIGFTPYGPYWRELRKFSTLELLSNRRIELLSHVRVSEVRASTKDLLSLWSTQKNESGYVLVDVKQWFAELTFNMVLRIVAGKTFFGAVDSESEDKASKCLKTIREMMRLMGLFTVGDAIPSLRWLDLGGHEKAMKETAKQLDEILSGWLDEHRKNMDLLSEEPRDFIDVMLSVFSHTNIHGFDADTIYKATILTMIVGGNDTTTVSLTWAMCLLLKNPHVLEKAKQELDEKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESDINNLVYLQAIVKETLRLYPAAPLAAPHEFTEDCNLGGYHIKKGTQLITNIWKINTDPYIWSDHLDFKPEKFLTTHKDIDVKGHHFELLPFGGGRRICPGISFGLKMLHFVLASFLHSFEILNPPIEFVDMSATLGLVIAKTTPLKIMVKPRLSPNCYVNM 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02563 577 Gene3D Cytochrome P450 35 570 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 SUPERFAMILY Cytochrome P450 40 568 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 Pfam Cytochrome P450 49 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 Pfam Cytochrome P450 416 550 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 Coils Coil 351 362 - -
Aip05g02563 577 PANTHER CYTOCHROME P450 82C3-RELATED 5 363 - -
Aip05g02563 577 PANTHER CYTOCHROME P450 82C3-RELATED 414 574 - -
Aip05g02563 577 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 507 516 IPR017972 GO:0005506|GO:0016705
Aip05g02563 577 PANTHER CYTOCHROME P450 82A2 5 363 - -
Aip05g02563 577 PANTHER CYTOCHROME P450 82A2 414 574 - -
Aip05g02563 577 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 PRINTS E-class P450 group I signature 425 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 PRINTS E-class P450 group I signature 466 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 PRINTS E-class P450 group I signature 504 514 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 PRINTS E-class P450 group I signature 514 537 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 Coils Coil 414 417 - -
Aip05g02563 577 PRINTS P450 superfamily signature 505 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g02563 577 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02563 Aip-Chr5 121695485 121698543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02563 415 575 Cytochrome P450 AT4G31940 51.852 3.99e-52 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02563 - - adu:107490967 673.315