Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02542 ATGCATTGGTTGAAGCAAAAAGGGAACGGGAATGGGAGCATGAGGTCGTCAGGGAGGAGGCTGTCCCTTGGGGAGTACAAGAGGGCGGTGTCATGGTCGAAGTACTTGGTGTCGGCGGGTGCGGCGATCAAGGGAGAAGGCGAAGAGGAATGGAGTGCTGACATGTCTCAGCTTCTCATTGGTTCCAAGTTCGCCACGGGAAGGCACAGCAGGATCTACAGAGGTGTATACAAGCAGAAGGATGTGGCCATCAAGCTTGTAAGCCTGCCTGAGGAGGATGAGGATCTTGCTTCTTTTCTTGAGAAACAATTCACTTCTGAGGTCTCCTTGCTCCTCCGCTTGCGCCATCCCAATATCCTCACTTTTATTGCAGCCTGCAAGAAACCTCCTGTCTTTTGTATAATTACCGAATACTTAGCCGGCGGATCATTGAGAAAATATCTGCATCAGCAACAATCAAATTCAGTTCCACTTGAAATTGTTCTGAAATTAGCCCTTGACATTGCACGGGGAATGCAATATCTTCACTCTCAGGGGATACTTCATAGGGATCTCAAATCAGAAAATCTGCTTCTGGGGGAAGATATGTGTGTAAAAGTAGCAGATTTTGGTATCTCTTGCTTGGAATCTCAGTGTGGTAGCGCGAAAGGATTCACCGGAACTTACCGGTGGATGGCTCCGGAAATGATCAAAGAAAAGCATCACACTAAGAAAGTTGATGTCTATAGTTTTGGCATAGTTCTATGGGAGATTTTAACAGGACAGACACCATTTGAAAACATGACACCAGAGCAAGCTGCATTTGCAGTTTCCCACAAGAATGCAAGGCCACCATTGCCATCTGAATGTCCATGGGCACTAAGTGACCTAATAAACAGATGCTGGTCAAGCAATGCAGATAAGAGGCCACATTTTGATGAGATAGTTCCCATTTTGGAGAACTACACAGAATCATTGGAGCAGGATCCCGAGTTCTTCACAACATACAAACCACGCCCTTCTAATAACACAACAATTCTTGGATGCATACCTAAGTGCAATACTCGCCATAAATCTACTGCTTGCAAAGCTTAA 1074 0.4562 MHWLKQKGNGNGSMRSSGRRLSLGEYKRAVSWSKYLVSAGAAIKGEGEEEWSADMSQLLIGSKFATGRHSRIYRGVYKQKDVAIKLVSLPEEDEDLASFLEKQFTSEVSLLLRLRHPNILTFIAACKKPPVFCIITEYLAGGSLRKYLHQQQSNSVPLEIVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWEILTGQTPFENMTPEQAAFAVSHKNARPPLPSECPWALSDLINRCWSSNADKRPHFDEIVPILENYTESLEQDPEFFTTYKPRPSNNTTILGCIPKCNTRHKSTACKA 357
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02542 357 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Aip05g02542 357 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Aip05g02542 357 PRINTS Tyrosine kinase catalytic domain signature 220 230 IPR001245 GO:0004672|GO:0006468
Aip05g02542 357 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
Aip05g02542 357 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Aip05g02542 357 Gene3D Phosphorylase Kinase; domain 1 48 139 - -
Aip05g02542 357 SUPERFAMILY Protein kinase-like (PK-like) 48 311 IPR011009 -
Aip05g02542 357 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 2 334 - -
Aip05g02542 357 CDD STKc_MAP3K-like 60 312 - -
Aip05g02542 357 ProSiteProfiles Protein kinase domain profile. 58 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02542 357 Pfam Protein tyrosine and serine/threonine kinase 60 311 IPR001245 GO:0004672|GO:0006468
Aip05g02542 357 SMART serkin_6 58 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02542 357 Gene3D Transferase(Phosphotransferase) domain 1 141 339 - -
Aip05g02542 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Aip05g02542 357 PANTHER SERINE-THREONINE PROTEIN KINASE 2 334 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip05g02542 Aip-Chr5 120780509 120786236 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02542 31 321 MAP Kinase Kinase Kinase AT1G62400 63.390 8.65e-136 390
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aip05g02542 PK_Tyr_Ser-Thr 6.9e-67 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02542 - - gmx:100807757 628.246