Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02529 ATGGAGCTGCTTCAGATCGAGAAGGAGCTCAAGGACGAAGCTTGCAGAGAATCCCTTAGAGTTGCCAATGAGGAGCACAAGAAGCTCAAGGCCGAAGCTGCACAGATTAGGGCTCTGGAGCGCAAGATCGCACAACAAGAATTCAGAGAAACACTCCTATTTGATGGTCACAATGGAACTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTAAACAACATTTTAAGTACAATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCATTGCCAGGGCTTTGGTTGCAGGATTTGTGA 300 0.4567 MELLQIEKELKDEACRESLRVANEEHKKLKAEAAQIRALERKIAQQEFRETLLFDGHNGTAAAIYAKENLLNNILSTIPSDLNRDEWIAALPGLWLQDL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02529 99 Coils Coil 19 49 - -
Aip05g02529 99 Gene3D - 4 94 IPR036457 -
Aip05g02529 99 PANTHER ALPHABET, ISOFORM E-RELATED 49 93 - -
Aip05g02529 99 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 49 93 - -
Aip05g02529 99 SUPERFAMILY PP2C-like 47 80 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02529 Aip-Chr5 120510303 120510788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02529 53 92 PP2C-type Phosphatase Gene Family AT1G47380 85.000 7.76e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02529 - - aip:110272292 196.823