Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02526 ATGAAGGAAGGGAATGATGGCTTTGTTAGAGCTGATCAGATTGATCTCAAGACCATTGATGAGCAGCTTGAGAGGCACCTCAACAAGGTTCTGACCATTGAGAAGAACAAGCAGAAGCAAGATGGAGAAGAACAACAACAACAACAAGATGTTGTTGCTGTTGCCACTGCCACCAAGTTGAAGAGTGTTGTCTCTTCTAGTTTCAAGAAGCAGAGGCAGGAGTGGGAAATTGACCCTTCTAACCTCATCATTAAAGGTGTCATAGCCCGTGGAACTTTTGGTACTGTCCACCGTGGTGTCTATGATGGCCAAGATGTTGCTGTTAAAATGCTGGACTATGGTGAAGAAGGGCAACGGACCGATGCTGAAATCGCAGCCCTGAGGTCGGCGTTTACACAAGAAGTTGCTGTTTGGCATAAACTTGATCATCCAAATGTGACAAAGTTCATAGGAGCAACAATGGGATCTTCAGAATTGCAGATACAAACTGATGATGGTCTAATTAGCCTGCCAAGCAATATTTGCTGTGTTGTTGTGGAGTATCTTGCTGGAGGTGCGCTTAAATCTTTCCTGATAAAGAATCGAAGAAGAAAGTTGGCTTTTAAGGTTGTCATCCAGTTGGCACTTGATCTTGCAAGAGGGCTGAGTTACCTTCATTCTCAAAAGATTGTTCATAGAGATGTAAAGACAGAGAACATGCTGTTGGATAAGACACGCACGGTTAAGATTGCTGATTTTGGCGTCGCCCGTGTTGAAGCGTCAAATCCGAATGACATGACTGGGGAGACCGGTACACTTGGTTACATGGCTCCCGAGGTGTGTCATTAG 828 0.4469 MKEGNDGFVRADQIDLKTIDEQLERHLNKVLTIEKNKQKQDGEEQQQQQDVVAVATATKLKSVVSSSFKKQRQEWEIDPSNLIIKGVIARGTFGTVHRGVYDGQDVAVKMLDYGEEGQRTDAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELQIQTDDGLISLPSNICCVVVEYLAGGALKSFLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVCH 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02526 275 Pfam Protein kinase domain 86 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02526 275 SUPERFAMILY Protein kinase-like (PK-like) 64 274 IPR011009 -
Aip05g02526 275 ProSiteProfiles Protein kinase domain profile. 82 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02526 275 Gene3D Phosphorylase Kinase; domain 1 70 164 - -
Aip05g02526 275 SMART serkin_6 82 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02526 275 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 273 - -
Aip05g02526 275 Gene3D Transferase(Phosphotransferase) domain 1 172 275 - -
Aip05g02526 275 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 273 - -
Aip05g02526 275 Coils Coil 16 36 - -
Aip05g02526 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02526 Aip-Chr5 120414082 120417572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02526 1 273 MAP Kinase Kinase Kinase AT5G50000 75.357 1.56e-155 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aip05g02526 Pkinase 6.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02526 - - gmx:100809898 444.891