Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02525 aTGTTCACCATGGCAGCACTTTCACCTTCACCTTCTCCTTCTTCTCCTTCAACATGCCCCCATCGACTTCAGCTATGGTTTCAGGTGCAGCATAAACTTGTCTCCGTTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGCTACGTTTGTGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGCAATTCTCAACCAAGAATTTCATTGGCAAGGGTGGATTTGGGCTTGTTTTCAATGGGGTTTTGTCCGATGGTTCAGTCGTGGCGGTTAAGAGGATCTTGGAATCTAATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCACCGGAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGTGGATGATGATGATGAAAAATTTAATGACAGGGGAAGTCAGAGGTTTTTGGTTTATGATTACATGCCGAATGGAAACCTTGAAGACCATCTGTTTTTGGTGAGTGAGCAGCAAAAGTTGAAGAAATCGCTGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATATGGCAAAGGGGCTGGCTTATCTGTCGTGCGATGCATGTGTTCACGGTGATGTATTTATCGTTTAA 681 0.4288 MFTMAALSPSPSPSSPSTCPHRLQLWFQVQHKLVSVDGNASHSENCFKFTILYAATFVNQYGPESNGAMSCIFGRLGGRSLMMMQFSTKNFIGKGGFGLVFNGVLSDGSVVAVKRILESNFQGDVEFCNEVEIISNLKHRNLVPLRGCCVVDDDDEKFNDRGSQRFLVYDYMPNGNLEDHLFLVSEQQKLKKSLTWPQRKSIILDMAKGLAYLSCDACVHGDVFIV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02525 226 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Aip05g02525 226 SMART tyrkin_6 86 225 IPR020635 GO:0004713|GO:0006468
Aip05g02525 226 SUPERFAMILY Protein kinase-like (PK-like) 85 223 IPR011009 -
Aip05g02525 226 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 17 75 - -
Aip05g02525 226 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 75 - -
Aip05g02525 226 Pfam Protein tyrosine and serine/threonine kinase 89 223 IPR001245 GO:0004672|GO:0006468
Aip05g02525 226 Gene3D Phosphorylase Kinase; domain 1 80 171 - -
Aip05g02525 226 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 85 215 - -
Aip05g02525 226 ProSiteProfiles Protein kinase domain profile. 86 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02525 226 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 85 215 - -
Aip05g02525 226 Gene3D Transferase(Phosphotransferase) domain 1 172 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02525 Aip-Chr5 120411589 120412795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02525 27 73 Receptor kinase-like Gene Family AT1G11050 51.064 2.75e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip05g02525 PK_Tyr_Ser-Thr 2.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02525 - - aip:107640759 334.339