Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02523 ATGAATCCAAGCGAGTTGCAGCGGTTTGCGGTGTCAAATCGATTCACAAGGTTCCCAAAATCGTTCTCCCTGCGGAAGAAGGTACCATGGTGGTACAAAATACTAGACCCACGGTCAAGATTCATCGCAAGATGGAACCGCACCTTCCTTTATGCGTGCATTGTGGCACTGTTCCTTGACCCTCTCTACTTCTACTATCCCATAACGGGCGACAAGGCTTGCATGCAAACCGATTGGTACCTGGGCGTCGTCGTCACCTTCGCCAGAACCGTGGCCGATCTTTTCTTCCTCTTCCACATGGTCCTCAAATTCCGGACGGCCTACGTTAACCCTCTCACTCGTGTTTATGGCCACAAGGAGCTCGTCACCGATCCCCACCTCATTGCCAAAAGGTACCTCAAGCATGATTTCATCATCGATCTACTTGCCACCCTTCCTTTGCCTCAGATTGTGATTTGGTTCGTGATTCCGGCAGTGAAAGGGTCAACTGTAGCACAAGGAAATCACACAATATCCCTCATTGTCCTCATTCAGTATGTTCCCCGATTGTTTCAGATTTTTCCTCTTCAACGTCGAATCTTAAAGACTAGTGGGCTTATAACCAAAACTGCATTGGCTGGGGCTGTGTACAATCTTTGTTTCTACATGTTGGCCAGCCATGTTTTGGGGGCATCATGGTATGTGTCATCGATCCAAAGACAATTTGAGTGTTGGAGAATAACTTGTAGGAGGGAGATGAATAGAACACACTCTCCATCTTGCAAACCAGCGTATCTTGATTGCAATCTTTTGGATGATCCAGCAAGACAAGCATGGTTTAAGAGAACCAGTGTGCTTGCTGACTGTGATGCTCTCAATGACAAGAATGACTTTCAATTTGGAATGTTTTCTGATGCTTTCACCGACCATGTTTCTTCCTCCACCTTTTCTCAAAAGTATTTTTATTGCCTTTGGTGGGGCCTCAAAAATTTAACATCTTATGCTCAAGGTCTTAATACGAGCACTTACGTTGGTGAAACCGTATTTTCAAGTTTCATTTGCATCGCAGGTTCAATCCTCTTTGCGCATCTCATTGGTAATATGCAGAATTATCTGCAATCTTCAACTGCAAGACTTGAAGAATGGAGACTGAAACAAAAGGATACAGAAGAGTGGATGAATCATAGGCAACTTCCACCGGAACTTCAACAACGCATTCGCAGGTTTGTTCAATATAAATGGCTTGCCACAAGAGGCGTAGATGAAGAAGCAATTTTGCGTGATTTGCCTATTGATCTTCGACGCCAGATTCAAAGGCATCTTTGTCTTGACATTGTTCGTCGGGTTCCTTTCTTCGGTCAAATGGATGATCAACTCCTAGATGCCATATGTGAACGTCTTGTTGCATCCTTAAACACAAAAGACACATACATTGTAAGGGAAGGTGATCCAGTGAGAGAAATGCTCTTCATCATTAGAGGACAACTTGAGAGTTCAACCACTGATGGTGGAAGAACAGGGTACTACAACTCTATCATTCTTAGACCAGGTGATTTCTGTGGTGAAGAGTTGCTGACGTGGGCCTTGATGCCCACCTCAAACCTCAGCCTTCCAGACTCTACTAGAACTGTCAAGACTGTTACTGAAGTCGAAGCGTTTGCTCTCAGAGCTGAGGATCTAAAGTTTGTTTCAAATCAATTCAAGCGTCTACATAGCAAGAAACTCCAGCATGCTTTTAGGTACTATTCCCATCAATGGAGGGCTTGGGGGGCTGCCTTTATACAGACTGCTTGGAGACGCTATCGTAAGAGAAAACTGACAATGGAGTTGTTACAAAAAGAGAACTTGTACTACACCAATATCGAGCAAGATGATGATGAAGGTGAAGAACAAAGGGTAGGAGGGAGTTCATCAAGTAGTGGAAACCGCGCACAGATTTCAACTACCGTTTTGGCATCTAGGTTTGCTGCAAACACAAGAAGAGGTGTCGCTAAGAAGATTGCAATACCTGATAGTGATAGTTTGAAGATGCCCAAAATGTTCAAGCCAACAGAACCTGATTTCTCAACTTTCCAAGATGAAAATTAA 2067 0.4403 MNPSELQRFAVSNRFTRFPKSFSLRKKVPWWYKILDPRSRFIARWNRTFLYACIVALFLDPLYFYYPITGDKACMQTDWYLGVVVTFARTVADLFFLFHMVLKFRTAYVNPLTRVYGHKELVTDPHLIAKRYLKHDFIIDLLATLPLPQIVIWFVIPAVKGSTVAQGNHTISLIVLIQYVPRLFQIFPLQRRILKTSGLITKTALAGAVYNLCFYMLASHVLGASWYVSSIQRQFECWRITCRREMNRTHSPSCKPAYLDCNLLDDPARQAWFKRTSVLADCDALNDKNDFQFGMFSDAFTDHVSSSTFSQKYFYCLWWGLKNLTSYAQGLNTSTYVGETVFSSFICIAGSILFAHLIGNMQNYLQSSTARLEEWRLKQKDTEEWMNHRQLPPELQQRIRRFVQYKWLATRGVDEEAILRDLPIDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVASLNTKDTYIVREGDPVREMLFIIRGQLESSTTDGGRTGYYNSIILRPGDFCGEELLTWALMPTSNLSLPDSTRTVKTVTEVEAFALRAEDLKFVSNQFKRLHSKKLQHAFRYYSHQWRAWGAAFIQTAWRRYRKRKLTMELLQKENLYYTNIEQDDDEGEEQRVGGSSSSSGNRAQISTTVLASRFAANTRRGVAKKIAIPDSDSLKMPKMFKPTEPDFSTFQDEN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02523 688 Pfam Ion transport protein 45 371 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aip05g02523 688 SUPERFAMILY Voltage-gated potassium channels 36 366 - -
Aip05g02523 688 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 10 684 - -
Aip05g02523 688 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 10 684 - -
Aip05g02523 688 MobiDBLite consensus disorder prediction 667 688 - -
Aip05g02523 688 CDD CAP_ED 444 575 IPR000595 -
Aip05g02523 688 Gene3D - 47 368 - -
Aip05g02523 688 Gene3D Jelly Rolls 442 562 IPR014710 -
Aip05g02523 688 SUPERFAMILY cAMP-binding domain-like 373 569 IPR018490 -
Aip05g02523 688 Gene3D Helix hairpin bin 370 435 - -
Aip05g02523 688 Pfam Cyclic nucleotide-binding domain 467 554 IPR000595 -
Aip05g02523 688 MobiDBLite consensus disorder prediction 615 637 - -
Aip05g02523 688 ProSiteProfiles cAMP/cGMP binding motif profile. 444 518 IPR000595 -
Aip05g02523 688 SMART cnmp_10 444 572 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02523 Aip-Chr5 120238511 120242794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02523 11 681 Ion Channels AT3G48010 63.324 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02523 K05391 - gmx:100783672 1160.21