Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02521 ATGGCGTCACTGACAAAAGGAGGGGGCGTCGCGGCAGAAAAGGGGACGATGGACTCTCTTGAGTGTGCCACGATAAGATACACTGGTACAGAAAAGGAGTTGCTCATCTCAAACATCTTTTTAGTTCCAAATCTTTACAACCTTAGCTCCACACAACGGCTAAACGCGAACCCnTCCCATCACCCTCGAGCTCCTCCTTCCTCTCTCCGTCATCGATCTCACTCCCTCACCTCCGTCCATCTCCCGCCGCCGTCGACGAAAGGAGCTTCGAAGCCACCGTCGTTATCGTACAGCTCTGTTCCACCATCGTGCAGCTACTGTTTCAGCTTTGAAAGCACCGTCGTGCAGCTCGGTTCCATTGTCACCGAGCTCGCCTCCTTTTTTTGTCGCGCAGCTCTGTTCCATTGTCACCGGCGCTATCTCTGTTCCACCTGTCATCCCTTCGGTTGTGCCCTTAAGGCTGTGTTTGATGAGGAAGATAAATGCAAGGAAAGGAATCCGGGAAATAGTTTGAAGAGAAAAGAGAGTGGTGGTGGAGGAAAGTCAACCTTGGAAGAATTGATAAGGGAAGAGGAGAAGAAAAAGGAGAAAATCAACAGGAAGGACTATTGGTTGCGTGAGGGAATCATTGTTAAGGTTATGAGCAAGTTCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTGGTGAGAAGAATATGCTTAAATACAGTTGCTCTTGCCTTCGAAAACAACACAACTCATTGA 747 0.4886 MASLTKGGGVAAEKGTMDSLECATIRYTGTEKELLISNIFLVPNLYNLSSTQRLNANXSHHPRAPPSSLRHRSHSLTSVHLPPPSTKGASKPPSLSYSSVPPSCSYCFSFESTVVQLGSIVTELASFFCRAALFHCHRRYLCSTCHPFGCALKAVFDEEDKCKERNPGNSLKRKESGGGGKSTLEELIREEEKKKEKINRKDYWLREGIIVKVMSKFLAEKGYYKQKGVVRRICLNTVALAFENNTTH 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02521 248 Pfam KN17 SH3-like C-terminal domain 200 233 IPR041330 -
Aip05g02521 248 MobiDBLite consensus disorder prediction 56 94 - -
Aip05g02521 248 MobiDBLite consensus disorder prediction 70 94 - -
Aip05g02521 248 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 158 234 IPR037321 -
Aip05g02521 248 MobiDBLite consensus disorder prediction 166 185 - -
Aip05g02521 248 Gene3D - 208 240 - -
Aip05g02521 248 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02521 Aip-Chr5 120225238 120227862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02521 142 239 C2H2 Transcription Factor Family AT1G55460 55.238 1.91e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02521 K13102 - gmx:100785931 112.079