Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02520 ATGGGTTTCCATTTACCTGTTATTCGAAGGACATCATCATTCTCAGCTAGCCAAGCAGCTTCAAAATCCGCGGAAGTCCCAAAGGAGCATCTAGCAGTGTATGTCAAAGAGAAACAGAAGCGGTTTGTGATCCCCGTTTCATACTTGAACCAACCTTCAATCCAAGATTTGTTGAGCCAAGCTGAGGAAGAGTTTGGATATGATCATCCTATGGGAGGTCTAACAATTCCATGCAGTAAAGATGTCTTCCAACAAATCACTTCTCACTTGAATTGA 276 0.4239 MGFHLPVIRRTSSFSASQAASKSAEVPKEHLAVYVKEKQKRFVIPVSYLNQPSIQDLLSQAEEEFGYDHPMGGLTIPCSKDVFQQITSHLN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02520 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
Aip05g02520 91 PANTHER AUXIN-INDUCED PROTEIN 6B 2 91 - -
Aip05g02520 91 Pfam Auxin responsive protein 12 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02520 Aip-Chr5 120224870 120225145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02520 5 84 Calmodulin-binding Proteins AT5G20810 43.750 7.18e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02520 K14488 - gmx:106798972 145.206