Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02519 ATGGTGTTTAAGGTCTTTGGTTCCAATTCTAAGACTCTTAACCAACAAAGTAGTGCGTCGAATAATCCATTGTTGCTATGCTGTATTGAGAAGGCCAAGATAGATCTGTTCATTGCTAAAAAAAGGAGAACAAATTCACTTGCTCTAATCAATATTCCTGGATTAGAGCTACCTAGTTGGGTGCAAGTCTGTTTTAGACCAACAGTTTCAATGGGTTTGGACGAAACTGAACTTGCAATTGCAACATACTTTTATGGTAATCATTTGATGGATAACTACGAGGAGGATATAGTATTTTCAGAGTTTACAGCTCACAAAGATGTATTCAGGAGCTTGATGCCAGAAAAGTCAATCATTTCTCTTGTGCTAGACTTAGTAGCAGATATGATGAGGATAGAGTTGACCAGAGAAAGTGGTTATTGGTTTTTACCCACAACTTTTGCGGTCTTTATCCTTGTATCTGAAACTACTGATGAAGGTCATGAACACTGGTACCTCGTAGTGATTGATCGTGTTAAAAGACAAATTATTTTGCTAGACCCATTACCCATTGGGAAACAGTTCAAGCGAAAGAGGACAGCCTTGAAATTAGCCATTTATTTGGACGAGGTATTGGAAGATCGTTCATTCTATGACTTTGAGACCACTCCAAATCTGATTTCTTCACAATTTGAATTTGAAGAGCTAGAAGGCCTTCCGACCCTCGAAGCTGGATCGAGTGACGCGGGTGTGTGGATTGCTAATTGGATGATAGCTTGTTTTGAAGATGATCATTTTAACATAAAGTTCTTTTATATGAGATCTGCTATATTGGATACTATTTCGGAAGAAAAGGATGAGGTTAACCTCACAGTTAGTGATTTTACTACCTTTGGTTTGTCATCCGAATCACGTCCTGAAAAAGCTGAAGCCATGCCAGATGTATTGCCTGAAAATGATATCCAAGCTGGTGAAAATGTAACAGATTTCAGTCTGACATCCGCTGCATTAGATACTAATTCGAAAGGGAAGGACAAGATTAGGTCTAATCAAGATGAAGATGAAATTATAACCCCTTCTGATGCTGTTGTGGGTGAAACATGTGAAGGGGAGTCTAAAATGGCAGTTAAGGATGCAATGAATGTTGGCTCGTCAACGGTATCAGATCCCCACAAAGCTGAAGTGATGCCAGATGTATTGCCTGAAAATAAGATATATGCTGATGAAAATTCCCTTCGGATACTGGTGTTGGTGGAAATGAAGTTGACAGGCCTTTCAGTTAAGGAAGCTATTGGAAAGGATTTACTTATGCTGGTTGAGGATTTTTCAGCAGAGAGAGTCAAGAAGATGCTGGACATGGCACTGCAGGCATTCTCTCTCATAAGCAGGGCTAGCTATGGAAATGTTGCCAAGAAATGGATTCCTGAGTTGAGGCATTATGCTCCTGGTGTTCCAATTATTCTTGTTGAAACAAAACTTGATCTTCGAGATGATAAGCAGTTTTTTCAAGATCATCTTGGTGCAGCGCCTATCACCACAGTGCAGGGTGAGAAACTGAAAAAACTTATCGGTGCTCCAGTTTACATCGAATGTAGTTCAAAAATACAGCAGCCAAGCCATCAAAGTAGTTCTCTAGCCTCCAAAGTAGAAGAAAAAGAAGAGAAAGGGTCAAAAAACCTGTTCCATATTGTGATCTTCTCAGTTCTAAATTGCATAACACATGATGGTGTTGGTGTTCCGGAAACATTACTGAACCAAATGTTCAGACGAGAGGGACAAGAATCCGAGGAGGGTATTAGTCTGCTCATTAGCAGAAAGTTGCTGAAGCTGATGAATGGAGACGTGCGGTATCTGAGGAAATCTGGCAAATCATCTTTCATCTTAACAGTTGAACTGGCTGCTTCCCAGAAATTGATTGCTTAA 1902 0.3996 MVFKVFGSNSKTLNQQSSASNNPLLLCCIEKAKIDLFIAKKRRTNSLALINIPGLELPSWVQVCFRPTVSMGLDETELAIATYFYGNHLMDNYEEDIVFSEFTAHKDVFRSLMPEKSIISLVLDLVADMMRIELTRESGYWFLPTTFAVFILVSETTDEGHEHWYLVVIDRVKRQIILLDPLPIGKQFKRKRTALKLAIYLDEVLEDRSFYDFETTPNLISSQFEFEELEGLPTLEAGSSDAGVWIANWMIACFEDDHFNIKFFYMRSAILDTISEEKDEVNLTVSDFTTFGLSSESRPEKAEAMPDVLPENDIQAGENVTDFSLTSAALDTNSKGKDKIRSNQDEDEIITPSDAVVGETCEGESKMAVKDAMNVGSSTVSDPHKAEVMPDVLPENKIYADENSLRILVLVEMKLTGLSVKEAIGKDLLMLVEDFSAERVKKMLDMALQAFSLISRASYGNVAKKWIPELRHYAPGVPIILVETKLDLRDDKQFFQDHLGAAPITTVQGEKLKKLIGAPVYIECSSKIQQPSHQSSSLASKVEEKEEKGSKNLFHIVIFSVLNCITHDGVGVPETLLNQMFRREGQESEEGISLLISRKLLKLMNGDVRYLRKSGKSSFILTVELAASQKLIA 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02519 633 Pfam Ras family 445 530 IPR001806 GO:0003924|GO:0005525
Aip05g02519 633 ProSiteProfiles small GTPase Rho family profile. 157 555 - -
Aip05g02519 633 SUPERFAMILY Cysteine proteinases 105 269 IPR038765 -
Aip05g02519 633 SMART rho_sub_3 423 546 IPR001806 GO:0003924|GO:0005525
Aip05g02519 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 444 529 IPR027417 -
Aip05g02519 633 Gene3D - 376 542 IPR027417 -
Aip05g02519 633 PANTHER RHO FAMILY GTPASE 442 533 IPR003578 GO:0005525|GO:0007264
Aip05g02519 633 Pfam Ulp1 protease family, C-terminal catalytic domain 156 229 IPR003653 GO:0006508|GO:0008234
Aip05g02519 633 Gene3D Adenoviral Proteinase; Chain A 82 278 - -
Aip05g02519 633 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 442 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02519 Aip-Chr5 120218777 120223063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02519 565 630 Histidine Kinase Gene Family AT1G09570 68.182 2.28e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02519 K04392 - adu:107482315 249.21