Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02518 ATGGCAAAGAGTCGTATAAAGGAAGGTGATCAATCTGAGGTTTTAAGTGTTGAGTATAAGTACAGTTCTAATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGCAGAGGCAGATATAATTAATACTGATGGTTGTGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGACTGGTATTTGATACAGAATCTCAAGTTTGTGAATTTTATGTCAAATATGCCAAGTGCTATGGATTTGCGTCCCGGAAAGACTTGAATGCAGTGGATGCTAATGGCAACATTAATACAAGAAAGTTGGTTTGTAATAAAGCAGGAGAAAGAAATTGGAAGCACCTTAAAATGGACAATCGGCAAAGGGAGCATAGGGCAATTACTCGTGTCAACTGCAGGGCGAGGATTCGGTTCATTTGTCACTATAGAACGGGTAAGTGGAAAGTCAGTGTCTTTGAGAGTGAACACAATCATCCACTGTATCTACCTAAGTACAGACATCTTATTGCCGCGAATCGTAGGCTTGATGAGGCCGATAAAACACAAGCAGACAGCTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTCCCAAAAAGGTGGATATGATAAAGTGGGTTTTACCAGCAAAGACTTACATAACCACATTAGTAAGACTAGGCGTGGCAAAGTGAAAGACGGTGATGCATTTGCTGCGTTGGCCTATCTATTTTCTAAAGCAGACAATGACCCATTATTTCTAGGAAAGTTCACCTTAAAGGATTGTAGGTTGGATAATTTGGTGTGGACTAATGGAAAAAGCGTTGTTGATTACGAATGTTTTGGCGATGTACTGGCTTTTGACACCACTTACAAGAAAAATGTATACAACAAGCCCTTAGTTATATTTTCAGGGACCAACCACCATAGCCAGACAATTATCTTTGGATGCACTCTGCTCTCAGATGAAAGGTCCGAAACTTTCAAGTGGGCACTGAAGGAATTTTCAGAAATCATGTCAGGAAAACTACCCAGAGGCGTTGTGACAGACGGAGACCGTGCTATGAGAAGGCTATCTTAG 1077 0.4058 MAKSRIKEGDQSEVLSVEYKYSSNESDDMVDVTVDEAEADIINTDGCEKLITDLTIEDIWGLVFDTESQVCEFYVKYAKCYGFASRKDLNAVDANGNINTRKLVCNKAGERNWKHLKMDNRQREHRAITRVNCRARIRFICHYRTGKWKVSVFESEHNHPLYLPKYRHLIAANRRLDEADKTQADSLRACGVKTCHIMGYMVSQKGGYDKVGFTSKDLHNHISKTRRGKVKDGDAFAALAYLFSKADNDPLFLGKFTLKDCRLDNLVWTNGKSVVDYECFGDVLAFDTTYKKNVYNKPLVIFSGTNHHSQTIIFGCTLLSDERSETFKWALKEFSEIMSGKLPRGVVTDGDRAMRRLS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02518 358 Pfam FAR1 DNA-binding domain 72 161 IPR004330 -
Aip05g02518 358 PANTHER OS02G0262500 PROTEIN 61 356 - -
Aip05g02518 358 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 356 IPR031052 GO:0006355
Aip05g02518 358 Pfam MULE transposase domain 283 355 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02518 Aip-Chr5 120208459 120209535 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02518 FAR1 4.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02518 - - aip:110272093 739.184