Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02506 ATGGGTCTGAAACTCATGTGGGTACCCTCCATTTTCATCATCTCGTTGTTCCTAAGTGTTAATTCAGAGGAACAAGTGGTGAAGCAAGCTTTGGTGAAGTTCATGGAAAAGCTTGCACCAAATAATGCGGAACGAGATTCCAAGAATTGGGGTTGGAACCTCACATCAGATCCATGCACTGATCATTGGCACGGTGTGATTTGTCATTCGGACAACAAAACCGTGATGAGCATAGTTCTTGAACATTTAAATCTGAAAGGTGTTCTAGATGCTACTTCTCTTTCCACTGCGAAGTCTCTTATGCTCCTTAGCCTAAAAAACAATACCCTACATGATTCTGTTTCGGAGGACATAGGGAACTTGAAGTCCCTAACTCATCTCTATCTAAATGGTAACCGATTCTCCGGAAAGCTTCCGATCTCTATTGGGAAAATAACCAGCTTGATGAGGCTTCATGTTTCCGATAACAACTTCTCCGGAGAGATACCTGAAATGTCTCGTCTTTCGCAGCTGGTATCTTTTCTTGCAGACAACAATAACTTCACCGGAAGAATTCCTCATTTCGACTTCTCAAAACTTCAGTTGTTTAATGTCTCAAACAACAAGTTATATGGTCCTATTCCTGATGTTAGAGGAAAATTCTTTCAAGATAGCTTTTATGGTAATCCTGGTTTGTGTGGAAAACCACTTGCTAATGCATGTCCACCTGCACCTGCACCTGCAGCTCCTCTTCCTCTTCCTCTTCCTCGGCCACCTCCGGATTCATCGCACGATGGTTTTAAGCTTTATTTAGGATACATAGTTCTTTGTTTCATGGTGTTGGCTTACATTGTCCTGAAATTGGTTCGAAAATTCAAGACAAAAGACAGAGCATTGGATGAAATGCAAAAGACAGAGAAAGACAAGCCTAATAGTGAAGCTTATTACAATTCAAGTGGATCAAAGAGTGGAATAATAATTGGAATGAGATCAGAGAGTTCATTTTCATCTTTGGAAAGCGGCATGGCTTCAGCTTCCGGTCTTGTGGTTCTTTCGAGCGCAGAGTATAAGGCGCTGCGATTCGAGGACTTGCTTGGTGCTCCGGCGGAGTTGGTTAGGAGAGGGAAGAATGGAAGCCTGTACAAGGTGATGATGGAGAATGGGATGGTTTTGGCAGTGAGAAGAGTCAAGGATTGTGGGATTTCAAAGCAACATTTTCAGACAAGGATGGAGATCATAGCAAAAGTGAAGCATCCAAGAGTGCTTCCGCCTCTTGCATATTATTGCTCTCATCAAGAGAAGCTCCTTGTCTATGAATACATGCACAATGGAAGTCTCTTCATGTTGCTTTTTGGATCCCAAAGTGGCGGGCACCACTCTTTTGGTTGGCGGAGCAGACTAAAAGTGGCGGCCGACGTAGCCGCGGCACTAGCACACATGCATGAGAATCTCAGAGAGAGTGAAGTACCATCACACGGCAACTTGAAATCAAGCAACATCTTATTTGACAAGAACATTGATCCATTCATAAGCGAATACGGCCTATTTGTGACCGAAAATAATAACCAACACTACTACCACCACTCGCAAAATATCATCAGAAACGGTGTCAAAGGTGATATCTACGCCTTCGGTGTGATACTCCTTGAGATGCTAACCGGGAAAGTGGTTAAGAATAGTGATGGGTTTGGTGATTTGGCGAAATGGGTGAACTCGGTGGTGAGAGAGGAATGGACAGTTGAAGTTTTTGACAAGTCACTAATCAGAGAAGGTGCATCTGAAGAGAGGATGATGAGCTTGTTGCAGGTAGCGTTGAATTGCACCAGTGCTTCTCCAAATGATAGGCCAAGTATGAATCAAGTTGCAATGGTTATAAGATCCCTGAAGGAGGATGAAGAAAAATCAGTGTCCTTCTGA 1896 0.432 MGLKLMWVPSIFIISLFLSVNSEEQVVKQALVKFMEKLAPNNAERDSKNWGWNLTSDPCTDHWHGVICHSDNKTVMSIVLEHLNLKGVLDATSLSTAKSLMLLSLKNNTLHDSVSEDIGNLKSLTHLYLNGNRFSGKLPISIGKITSLMRLHVSDNNFSGEIPEMSRLSQLVSFLADNNNFTGRIPHFDFSKLQLFNVSNNKLYGPIPDVRGKFFQDSFYGNPGLCGKPLANACPPAPAPAAPLPLPLPRPPPDSSHDGFKLYLGYIVLCFMVLAYIVLKLVRKFKTKDRALDEMQKTEKDKPNSEAYYNSSGSKSGIIIGMRSESSFSSLESGMASASGLVVLSSAEYKALRFEDLLGAPAELVRRGKNGSLYKVMMENGMVLAVRRVKDCGISKQHFQTRMEIIAKVKHPRVLPPLAYYCSHQEKLLVYEYMHNGSLFMLLFGSQSGGHHSFGWRSRLKVAADVAAALAHMHENLRESEVPSHGNLKSSNILFDKNIDPFISEYGLFVTENNNQHYYHHSQNIIRNGVKGDIYAFGVILLEMLTGKVVKNSDGFGDLAKWVNSVVREEWTVEVFDKSLIREGASEERMMSLLQVALNCTSASPNDRPSMNQVAMVIRSLKEDEEKSVSF 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02506 631 Gene3D Ribonuclease Inhibitor 25 189 IPR032675 -
Aip05g02506 631 PANTHER LRR RECEPTOR-LIKE KINASE 4 630 - -
Aip05g02506 631 Gene3D Phosphorylase Kinase; domain 1 346 433 - -
Aip05g02506 631 SUPERFAMILY Protein kinase-like (PK-like) 363 616 IPR011009 -
Aip05g02506 631 Gene3D Ribonuclease Inhibitor 190 237 IPR032675 -
Aip05g02506 631 Pfam Protein kinase domain 367 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02506 631 ProSiteProfiles Protein kinase domain profile. 359 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02506 631 PANTHER OS05G0588300 PROTEIN 4 630 - -
Aip05g02506 631 SUPERFAMILY L domain-like 52 229 - -
Aip05g02506 631 Gene3D Transferase(Phosphotransferase) domain 1 434 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02506 Aip-Chr5 119921259 119925149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02506 52 622 Receptor kinase-like Gene Family AT1G68400 35.082 8.69e-100 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip05g02506 Pkinase 1.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02506 - - gmx:100787974 686.411