Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02503 ATGAAGTTTAAAGAGCTAACTGCATATCAGATTCGAAGGCTTCATTTTCCAGATCGATCGGTTGCCTTTTCCTTCTACAACTTGTATGTCAAAATGAATGGTTTTTCTGCACGGAAGAGTCGGATACGACGTAATGTGAACAATGACGTGACACAACAAGCATTTGTGTGCTTTAGACAGGGTTTTAGAGACTCGTGCTCTGGTAATGACGCTGCTCGACGCAAACAGGAACCAAAGCCTACAACTAGATGTGGATGTGGGGCAGAGATGCGTGTGCATATACATGAGGAGACGGGCAGATGGATTGTAACCTACTTTCAAGAGGAACACAACCATGAGATGCTTGATGATATGTTAACTTTTATGCTTCTTGGGCATAGGAAAATGAATTCTGCTGCAATTGATCAGATGAACATGATGCTGAAAGTTGGTATTAAAACTCCTCAGATTTATTCATCATTTGTACACACTGCAGGCGGATTTCATAATGTGCCCTTTTTGAAAAGAGATATGTATAATCAGATAGACAAGCAACGGAGGCTCATAGGCGGTGATACCATGGCTTGCCTTAAGTATTTGGAATCAACGGCAGCAGAGAGCCCAGGAATATTCGTGCGATACCTGGCAGATGATGAGGGTCGATTGGTCCACCTTTTCTGGTCAGACAATTGTAGCCAATTGGACTACCATTTGTTTGGGGATGTGGTTGCATTTGATGCGACTTATCGAAAGAATAAGTATATGTGCCCTTTAGTTGTGTTTTCCGGTGTCAATCATCATAACCAAACCATTGTGTTTGCATCTGCACTTGTTGCAAGTGAGAACGAGGCAACCTATACGTGGTTACTTGAACAGTTTCTAGATGCCATGAAGGGAAAGAAGCCTGGGTGTGTGATTACCAATGGGCATGGAGCAATGAAAAAGGCCATTGAGACTGTGTTTGCCAGTGCTTATCACCACCTATGTGCTTGGTACCTGATAAGGAATGCAACATCAAACCTCAGCAACCCAACATTTACGTCCGAGTTTAAGAAATGTATGCTTTTTGATTATGAGCTGTCAGAGTTTGAAGAGAAATGGGAGAAGTTGGTGTCTAGCTTGGGTCTTCATGACAATGAATGGGTTTGTGACCTTTATGCCAGGCGCAAGATGTGGGCAACCGCTCACATTAGAGGACGTTTTTTTGGAGGCTTTCGCACAACCTCTAGATGCGAGGGATTGCATTCTATGCTTGGAAAATTTGTTCATTCTAGGCATAACCTGAGAGATTTTGTTGAATAG 1281 0.4278 MKFKELTAYQIRRLHFPDRSVAFSFYNLYVKMNGFSARKSRIRRNVNNDVTQQAFVCFRQGFRDSCSGNDAARRKQEPKPTTRCGCGAEMRVHIHEETGRWIVTYFQEEHNHEMLDDMLTFMLLGHRKMNSAAIDQMNMMLKVGIKTPQIYSSFVHTAGGFHNVPFLKRDMYNQIDKQRRLIGGDTMACLKYLESTAAESPGIFVRYLADDEGRLVHLFWSDNCSQLDYHLFGDVVAFDATYRKNKYMCPLVVFSGVNHHNQTIVFASALVASENEATYTWLLEQFLDAMKGKKPGCVITNGHGAMKKAIETVFASAYHHLCAWYLIRNATSNLSNPTFTSEFKKCMLFDYELSEFEEKWEKLVSSLGLHDNEWVCDLYARRKMWATAHIRGRFFGGFRTTSRCEGLHSMLGKFVHSRHNLRDFVE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02503 426 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 418 IPR031052 GO:0006355
Aip05g02503 426 Pfam MULE transposase domain 235 329 IPR018289 -
Aip05g02503 426 PANTHER OS02G0262500 PROTEIN 19 418 - -
Aip05g02503 426 Pfam FAR1 DNA-binding domain 24 115 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02503 Aip-Chr5 119795966 119797246 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02503 MULE 2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02503 - - aip:107642023 890.182