Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02496 ATGATATATGAGTTGCAGCAGGAAGAAGAGTTGGGTGATGAGTTAGACGGTGAGGAGATATTTGAAGAATTGACAGATTATGATTATGATGATGTATATGGATTGGATTCAATTGAGGATTTATTGAAACTTGACTTTTTAAACATTGGATATCGATTAGAGAAGTGGTACACTTTGCCAAACAGAAAAAGGGAACCAAAGACTAAGACAAGAACTGGGTGCGAAGCTCAATTCCAAGTCAAGTTTGTAGGGGTAACTGGAAGATGGCATGTGACCCGATTTTCAAATGTTCATAATCACGAAATATTGGAAGGTCGGTTGAGCAGGTTATTGCCAGGTCATCAGAGTATGTCCAAAGTCGAAATTGCACTCATGAACAACACGCACAAGTCGGGAATTAGCACATCCCAGGTTTATGCTTTGCTAGCAAGTCAAAGTGGCGGTTTTGACAAGTTAAACTATGGCCTTAGAGACATGTACAATCAAATAGCTAAGGTGAGGCGTGAGATTCCAGAAGATGTGGGTAGAGCATTAAATTATTTGGAGGAGATGGCTGTAAAGGATAAATCTTTATACTACAAAGAGCTTGGGCGACGGATGGAAGGTGTCAACCATCACAACCAAATTGTTGTCTTTGCTGCATGTATTGTAACAGATGAGACGGATGAGACTTATATATGGGTGTTGCAACAGTTTTTGGAGGCAATGAATGGTAGAGCCCCATCCTCTATGATAACTGATGGGACAAGGGCAATGAAGAATGCGATTGAGAAAGTATTTCCTGATAGGTTCTATGAAGCAAGGGATCTTATGCTTGATCTTTATAGCTCATACAAAGCACTCGATGAAGGGAACACGCCTTCGAAACCTGGACTGGGAGGTGGTACCAATCCTAAAGGGCATAGTGGTCGAAAAAAGCGCCAACGTTGCAGCAATTGCAAGAAACCTGGTCATAATAAAACTTCTTGTTCAAAGCACAATGAAAATGCTTTCAGTACACAAGGTAGCTCTACCCGTCAAACTGATACAATTTATGATGGTGAATGCATGGATAATGTGGAATACGAAACTCAAGAGTGGTGGCGAACTATGGGATTTAGATATAGCTTTGTTCGTGATTAA 1122 0.4064 MIYELQQEEELGDELDGEEIFEELTDYDYDDVYGLDSIEDLLKLDFLNIGYRLEKWYTLPNRKREPKTKTRTGCEAQFQVKFVGVTGRWHVTRFSNVHNHEILEGRLSRLLPGHQSMSKVEIALMNNTHKSGISTSQVYALLASQSGGFDKLNYGLRDMYNQIAKVRREIPEDVGRALNYLEEMAVKDKSLYYKELGRRMEGVNHHNQIVVFAACIVTDETDETYIWVLQQFLEAMNGRAPSSMITDGTRAMKNAIEKVFPDRFYEARDLMLDLYSSYKALDEGNTPSKPGLGGGTNPKGHSGRKKRQRCSNCKKPGHNKTSCSKHNENAFSTQGSSTRQTDTIYDGECMDNVEYETQEWWRTMGFRYSFVRD 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02496 373 MobiDBLite consensus disorder prediction 300 314 - -
Aip05g02496 373 Pfam MULE transposase domain 202 262 IPR018289 -
Aip05g02496 373 MobiDBLite consensus disorder prediction 315 342 - -
Aip05g02496 373 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 202 263 IPR031052 GO:0006355
Aip05g02496 373 Pfam FAR1 DNA-binding domain 61 103 IPR004330 -
Aip05g02496 373 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 194 IPR031052 GO:0006355
Aip05g02496 373 MobiDBLite consensus disorder prediction 285 342 - -
Aip05g02496 373 PANTHER OS02G0262500 PROTEIN 202 263 - -
Aip05g02496 373 PANTHER OS02G0262500 PROTEIN 49 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02496 Aip-Chr5 119697191 119699573 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02496 MULE 5.1e-13 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02496 - - adu:107488613 353.984