Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02490 ATGGCGATCTCAACACCAAGAAGAGAGCTCTTCATAGATGGAGAGTGGAAAGCCCCTCTCCTCAACAACCGAATTCCAATCATCAACCCTTCCACTGAACTCATCATAGGGGATATCCCAGCAGCTACTAAGGAAGATGTGGAACTTGCGGTGGATGCTGCAAGAAGAGCACTGTCTCGGAACAAGGGAAAAGATTGGTCAACGGCTTCTGGCTCTCTTCGTGCTACATATCTTAGAGCCATTGCTGCAAAGATAACGGAGAAAAAGGATGAGCTTGCAAAGCTTGAAGCTACTGATAATGGGAAACCGCTTGATGAAGCAGCAGCCGACATGGATGATGTTATTGGTTGTTTTAGCTACTATGCTGAACTTGCTGAAGGGTTGGATGCAAAGCAAAAGGCACATGTGTCTCTTCCTATGGAGAACTTCAAGAGTTATGTGATCAAGGAGCCAATTGGTGTTGTTGCGTTGATTACTCCATGGAACTATCCATTGCTAATGGCGGCATGGAAAGTTGGTGCTGCTCTGGCTGCTGGTTGTACTGCAGTATTGAAGCCATCTGAACTGGCATCTGTGACATGTTTGGAGTTGGCCGAAATATGCAAAGAAGTAGGTCTTCCAGCAGGGGTGTTAAACGTGATCACTGGATTAGGCACTGAAGCCGGGGCTCCTTTGGCTTCACATCCTGATGTAGACAAGATATCCTTTACTGGAAGTTCTGCAACTGGAAGCAAAATTATGCAAGCTGCAGCTCTGCAAGTCAAGCCTGTTTCACTAGAGCTTGGTGGAAAAAGTCCAATTATTGTTTTTGACGATGTTGACATTGATAAGGTTGCTGAATGGACCATGCTGGGCTGTTTCTTTACCAATGGTCAGATATGTAGTGCAACATCTCGGCTTATTGTCCATGAAAATATAGCAACAAAGTTTTTGAATAGGCTTGTGGAATGGGCTAAAAACATCAAAGTTTCAGATCCCTTGGAAGATGGTTGCAAATTAGGCGCCATTGTTAGCGAAGCTCAGTATCAAAAAGTTCTCAAGTTTATTTCAACTGCTAAGAGTGAGGGTGCAACAATTTTGACCGGAGGGTCTCGCCCTGAGAATTTAAAGAAGGGTTACTTTGTTGAACCAACCATTATAACTGATGTGAGTACCTCAATGCAAATTTGGAGAGAGGAAGTTTTTGGACCTGTGCTCTGTGCCAAAACATTTAGCAGTGAGGAAGAAGCCATTGAACTAGCAAATGATACCCACTATGGCTTAGGGTCAGCTGTGATGTCAAATGATCCAGAAAGATGTGAGCGGATATCCAAGGCTGTTCAGGCTGGAATTGTATGGATCAACTGTTCTCAACCAACTTTCATTCAAGCCCCATGGGGTGGCATTAAACGTAGTGGGTTTGGTCGCGAATTAGGAGAATGGATGTCGGATAAAGGCAAAGCCATAGCCACCGCCTCCAAGAAGAGAAAACACTCTACCCCCTCCATTCCTTCCATCTACAAGAACTATGCTAGGAATCCTTTGCAGGACGAGGATAAAGAGAATCAGCAGTTACCTTCTACCAATCCTGGCAAATTCCCCAATCTCTACTGTGAGCTTCGGTTCTCTAGATATCGAACCACGAAGCTGAATATTGAGAAGAAGTTGCTCCTACCTAATGATGTGAGACGGCGCATTAATGGTCGGATCCTTGAGTTAGatgatgatgtgcgaccaccaccagctgatgcagatgacagggagattactatcccctggggtgtttgggtgcacgagaagccacctgctagccgccgctctcgggctagggctgtcatagggacaccttcaccaccagcccctgtagctggcccatcatcttctacagccgcagctcctccgccatctacagaccctccagcagcacctgagcctacctatctcctggtccagcgtctcttccggttcttagagcgcgagcgacaccatgtcagacgccgtttggatcggatggaccaggcccttatctctctgggcgccgagctacctccgcttcccgattctccggcctccgatgagcaggatcatcaggaggaggacgcggaggcaccagctcagcaggatgcccctgacactacagagccagcacacatggaggcaccacctcagacacaggagactcagccggtcccacagccacagacagagccagagcctatcgttgtacctcccactgatcctccggtttag 2229 0.3405 MAISTPRRELFIDGEWKAPLLNNRIPIINPSTELIIGDIPAATKEDVELAVDAARRALSRNKGKDWSTASGSLRATYLRAIAAKITEKKDELAKLEATDNGKPLDEAAADMDDVIGCFSYYAELAEGLDAKQKAHVSLPMENFKSYVIKEPIGVVALITPWNYPLLMAAWKVGAALAAGCTAVLKPSELASVTCLELAEICKEVGLPAGVLNVITGLGTEAGAPLASHPDVDKISFTGSSATGSKIMQAAALQVKPVSLELGGKSPIIVFDDVDIDKVAEWTMLGCFFTNGQICSATSRLIVHENIATKFLNRLVEWAKNIKVSDPLEDGCKLGAIVSEAQYQKVLKFISTAKSEGATILTGGSRPENLKKGYFVEPTIITDVSTSMQIWREEVFGPVLCAKTFSSEEEAIELANDTHYGLGSAVMSNDPERCERISKAVQAGIVWINCSQPTFIQAPWGGIKRSGFGRELGEWMSDKGKAIATASKKRKHSTPSIPSIYKNYARNPLQDEDKENQQLPSTNPGKFPNLYCELRFSRYRTTKLNIEKKLLLPNDVRRRINGRILELDDDVRPPPADADDREITIPWGVWVHEKPPASRRSRARAVIGTPSPPAPVAGPSSSTAAAPPPSTDPPAAPEPTYLLVQRLFRFLERERHHVRRRLDRMDQALISLGAELPPLPDSPASDEQDHQEEDAEAPAQQDAPDTTEPAHMEAPPQTQETQPVPQPQTEPEPIVVPPTDPPV 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02490 742 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 478 - -
Aip05g02490 742 MobiDBLite consensus disorder prediction 673 742 - -
Aip05g02490 742 Pfam Aldehyde dehydrogenase family 23 476 IPR015590 GO:0016491
Aip05g02490 742 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 475 IPR016162 GO:0016491
Aip05g02490 742 SUPERFAMILY ALDH-like 5 473 IPR016161 GO:0016491
Aip05g02490 742 MobiDBLite consensus disorder prediction 719 742 - -
Aip05g02490 742 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Aip05g02490 742 CDD ALDH_F10_BADH 27 474 - -
Aip05g02490 742 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Aip05g02490 742 Coils Coil 78 98 - -
Aip05g02490 742 MobiDBLite consensus disorder prediction 597 637 - -
Aip05g02490 742 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Aip05g02490 742 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02490 Aip-Chr5 119540184 119558916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02490 1 477 Aldehyde Dehydrogenase Gene Family AT1G74920 76.101 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02490 K00130 - gmx:100170755 818.535