Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02482 ATGGCAGCTGCCGCCGATGTTTTCATTCAGCGACTGCCTGAAGTGTCCGCGCGTGAGCTTCACGTCCTTGCCGTTGATGACAGCCATGTTGATCGCAAGGTCATTGAACGGTTGCTCAAAATCTCTTCATGCAAAGTGACAGTTGTGGACAGTGGAACTAGAGCTTTACAGTATCTAGGGTTGGATGGAGGAGAGAAAAATAGTTCAATTGATTTTGATAGCATGAAGGTTAATCTGATAATGACTGACTATTCCATGCCGGGGATGACAGGATTTGAACTCCTAAAGAAGATCAAGGAATCATCGATATTTAGAGAGATTCCGGTGGTGGTGATGTCTTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAAGAAGGAGCAGAGGAGTTTCTGTTGAAACCTGTTAAGTTGTCCGATGTAAAACGTGTGACGGATTTCATCATGAGAGGTGAAGGGATGAAAGGAGGCAAAAGATCTCAAAAACGAAGGCGTTCCGTTGATTGCATTCCGTCTCTAACAACTGAACTTTCACCATTGTCTCCATCCACCTTGGCCTCAAAGAAATCTAAACTATGA 582 0.4399 MAAAADVFIQRLPEVSARELHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGGEKNSSIDFDSMKVNLIMTDYSMPGMTGFELLKKIKESSIFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMRGEGMKGGKRSQKRRRSVDCIPSLTTELSPLSPSTLASKKSKL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02482 193 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 13 179 - -
Aip05g02482 193 Gene3D - 20 191 - -
Aip05g02482 193 SUPERFAMILY CheY-like 19 151 IPR011006 -
Aip05g02482 193 CDD REC_typeA_ARR 22 145 - -
Aip05g02482 193 Pfam Response regulator receiver domain 22 143 IPR001789 GO:0000160
Aip05g02482 193 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 179 IPR045279 GO:0009736
Aip05g02482 193 ProSiteProfiles Response regulatory domain profile. 21 150 IPR001789 GO:0000160
Aip05g02482 193 SMART REC_2 20 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02482 Aip-Chr5 119223219 119225709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02482 20 178 Response Regulator Gene Family AT5G62920 71.069 1.22e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip05g02482 Response_reg 9.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02482 K14492 - gmx:100819165 265.774