Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02480 ATGTCAGACCCTAGTTATGCAATTGCAAAGGCTGTGGCTGCTACAGCCGGAGCTATGTTACTTATTGCAGGGATTTTCTTTTACTTGTTCCAAAAATATGCACCTGCTACGTACCCCAAGAGGAACAAATTTCCATATGATTATGAGGGTATAAGGAAACTTGTTGGCGGCAATGTGAAGGGACTAATTATGGAAGAAAATGGGGTTGATGTTCTTTACATGTTGGACACTGGAGGCAAAGAGTTGGTAACGGGATTCACAAGTAGTAGCTTCAATCCTAGTTTTGAAGATGATGATTTAAAACAAGAAAAGAGAATTGATGTTGTGGTCCAAAGATCCAAAATATCAAAGCCTAAGGTGATTCTAGAACCTCCACTTCCTCCACTATCACAAGCTTCACCAAGAATTGATCAAGAGAAGAAAACTCAACCACCACCTCCTCCTCCGCCTCCACCTCCTCCTCCACCACCGCCTCCTCTCCCTCCACTACCACCGCCACCGGCACCAAAGGCACTGCCACCTGGTCCACCTCCACCTCCAAAGGCTGGTGGCTTCAGTTCATCATCCTTGAAGCCCCCACCTGTGCCTAAAGGGAAACCAAACAGCCAAAGAACCAAAGAGGGTATTCTAGGAGAGAGCTCAAGAGAGAAGAAGGGTGCCGGTGAAACAAGGCTTAAGCCTCTACATTGGGATAAAGTTATGGCTAATGTTGATCATTCAACAGTGTGGGATCAGATCAACGATGGTTCTTTTAGGGTTGATGATGAGCTCATGGAAACACTCTTTGGTTATTCAACCACCAACAAAACTCAAGAAAGAAACAAAAGTGTCTCAACTTTGACAAAGTCCAACTCCAACACACCAACTCAAATATTCATTTTGGAGCCAAGAAAATCCCAAAACACTGCAATTGTTCTAAGATCACTTGCCACCTCTCGCAGGACTATCTTGGAAGCACTACTTGACGGCCAAGGACTAAGCCTAGAGACGCTCGAAAAGCTCACCAAAATAGCTCCCACACAAGAAGAAGAATCCAAGATCATGCAGTTCAATGGCAACCCTGAAAAGCTTGCAGACGCCGAGTCTTTCCTCTACCACATCCTCAAAGCGGTTCCAACCACATTCCATCGTCTCAAAGCCATGCTTTTCAGGTATACTTATGACTATGAAGTTCTTCAACTGAAAGAATATTTGCAAGCACTCGAAATGGGTTGCCGGGAACTGAGAACTAGTGCTTTGTTCCTGAAGCTTCTTGAAGCAATTCTCAAAGCTGGGAACAGAATGAATGCGGGAACATCAAGAGGGAATGCAAAAGCATTCAATTTGAGTGCTCTTAAAAAACTCTCTGATGTGAAAAGCACAGATGGAAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTGGTTCAATCAGAAGGTAAAAGAAAAGCTATGTACCAAAGAATCAATGGCGAAAAAGAACACATAATGCTTGGTTTTGCAGCCCTGGATGGGTTAAGAGATGAGATATCTGAAGCAAAGAAAGCAGCGAGTATAGAGTATCAAACTTTTATCACAATGTATTCCAATCTCAATTCTCATGTTATTGAAATCAAGGAGATTGTAACAAAATGTTGTGGCAGCAGCAACACTAGCGTTGATGGGTGTGGTGGGTTTTTAAAGGAAATGAAAGGGTTCATAGAGGAATGTGAGGAAGAGCTTAAGGTTGTGAAAGAAGAGCAAACAAGGATCATGGATCTTGTGAGGAAAACTAATGGTTATTACCTACCAGGAACATTTTTATCTAAAGATAACGGCAATTTGACGAACCCCTTTGAATTGTTTGTGATTGTGAAAGATTTTGTTGATATGGTGGATCAGGCTTGTGTGGAGCTTAAAAAGAAGATGGAAAAGAAGGGTGTTGTAGGAACAGCAGAAGGTGGATTGGAACCACTACCTTTGTCTCCTTCAAAGAGGGTACCACCTAGATTTCCCAACTTTGATTTATATTTTTCGTCAAATGTGTTGGAATCTACTTCCTTCAGCCAATCAGAAGATGATTCCTGA 2046 0.4238 MSDPSYAIAKAVAATAGAMLLIAGIFFYLFQKYAPATYPKRNKFPYDYEGIRKLVGGNVKGLIMEENGVDVLYMLDTGGKELVTGFTSSSFNPSFEDDDLKQEKRIDVVVQRSKISKPKVILEPPLPPLSQASPRIDQEKKTQPPPPPPPPPPPPPPPPLPPLPPPPAPKALPPGPPPPPKAGGFSSSSLKPPPVPKGKPNSQRTKEGILGESSREKKGAGETRLKPLHWDKVMANVDHSTVWDQINDGSFRVDDELMETLFGYSTTNKTQERNKSVSTLTKSNSNTPTQIFILEPRKSQNTAIVLRSLATSRRTILEALLDGQGLSLETLEKLTKIAPTQEEESKIMQFNGNPEKLADAESFLYHILKAVPTTFHRLKAMLFRYTYDYEVLQLKEYLQALEMGCRELRTSALFLKLLEAILKAGNRMNAGTSRGNAKAFNLSALKKLSDVKSTDGKTSLLHFIVEQVVQSEGKRKAMYQRINGEKEHIMLGFAALDGLRDEISEAKKAASIEYQTFITMYSNLNSHVIEIKEIVTKCCGSSNTSVDGCGGFLKEMKGFIEECEEELKVVKEEQTRIMDLVRKTNGYYLPGTFLSKDNGNLTNPFELFVIVKDFVDMVDQACVELKKKMEKKGVVGTAEGGLEPLPLSPSKRVPPRFPNFDLYFSSNVLESTSFSQSEDDS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02480 681 Coils Coil 553 580 - -
Aip05g02480 681 Pfam Formin Homology 2 Domain 219 618 IPR015425 -
Aip05g02480 681 MobiDBLite consensus disorder prediction 209 225 - -
Aip05g02480 681 MobiDBLite consensus disorder prediction 140 183 - -
Aip05g02480 681 Gene3D Formin, FH2 domain 236 634 IPR042201 -
Aip05g02480 681 SUPERFAMILY Formin homology 2 domain (FH2 domain) 149 632 - -
Aip05g02480 681 PANTHER FORMIN-RELATED 5 676 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip05g02480 681 ProSiteProfiles Formin homology-2 (FH2) domain profile. 215 644 IPR015425 -
Aip05g02480 681 MobiDBLite consensus disorder prediction 120 225 - -
Aip05g02480 681 PANTHER FORMIN-LIKE PROTEIN 5 676 - -
Aip05g02480 681 SMART it6_source 215 633 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02480 Aip-Chr5 119208511 119211176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02480 8 658 FH2 protein (formin) Gene Family AT1G70140 40.673 1.40e-143 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02480 - - gmx:100819989 702.205