Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02446 ATGGGACTGGAAGAACTCCCAAATTGCACACAAGCTTGTGATACTTCTTCGCAGATGTCTTGCATGAGTGATGGATATAACCAACACCAAAGTCTAGTTTCCCCCATAACAAGAAACCAGTGCTTGGGGAATTCTAGAAGGGACAATGCCTTAATCGAAAATTCACGATTTTCACTTAAACCAATCCCATGGAGGCAACCTGATGCAAGCCAAGATCCTGATTTACAAGTTTCCAAGGGAAGTGAGACTTTGACAACAGCTTCAAAATCCTTCCACTCTGTATATGGCGAAATTGAGAAAAGGATTGCAGATCTTCAATTTAAAAATTCAGGAAAGGACCTCAGAGCCCTTAAGCAGATTCTAGAAGCAATGCAGAGATACAAAGATTCACTAGATATTACAAGAGACCAGGAAATAAATTACCCTTCTGACAGAGGTCTGAGTGAAAGCTCGGAACTACAGACCCCAAGACAACAGACCAACCCAACATTTGTCACTGATGATATTTCAAGTTCACCCCAGGGTAGAAAGTTTCCAATTATCATCATGAAGCTAGCACAAATCTCAAGGAAATCCAATGTCGCTACCAAAGAAATGACTAATGGCAAATCAGGCCGCATCAAGTTTTCTACCAATGATCCCAAAGATGGAAGATTGCTTGACAATATTGAAAGTCAAATAGCAAAAGGAACCAGTTCAACAAATCCTTTTAGTCAACGCTTCCATTCTGCAGATAAGAGTAACATGAAGAAAACTTCAAAATTAATGCAAGCCTCAAAAGTCCCTCAGGTCATCAATGGAGAGGACACCAATAACTCCAGCCATACAGCAGAAACTAGAAGCCCAAGAGTACAAAATAAGTTTGGTTTTGAAAAGTGTTCACCTACAAACCAATCATCAGAGTCCAAAAGTAAAAGAAGACAACACAAGCAATCATCAGAGTCATTGTCCCTAAGTTCCACCCCTAAGCAAAAAGTTTGTACCTTGCAGCAAAGAAATGAAGGCTTCAGCAAGATCCGGTGTCAAAAGAGGAACTTTAAGCATCAAGTTGATGTTATTTCCTCCAATGTTGACAGCAACAGAAGCATGGATTCTCACCGTGACATAGAGGGCACCCAAGCTGATCATTCTGAAAGCAACAACATCATTTCCATTCAACAGGTGACTCACATGAATCAAAATACTGCTACAAAGGAGCTAAGCAAGGAAAGTGCTATGGCCATGATAACAGTTACTTCAGAACAACAAAGTCCAGTTTCTGTTCTTGATCTACAATTTTACAGTGAAGACCCACCTTCTCCAATTAAAAAGAAGACAGAAACCTCAAAAGATTTAGATGAAGCTTTAGCCACTCCTGATAACATAAGGCATGCATTGGACCTTCCTCTTTCATTCAATAACACAAAGGCTAAAAGAGTATAA 1422 0.3987 MGLEELPNCTQACDTSSQMSCMSDGYNQHQSLVSPITRNQCLGNSRRDNALIENSRFSLKPIPWRQPDASQDPDLQVSKGSETLTTASKSFHSVYGEIEKRIADLQFKNSGKDLRALKQILEAMQRYKDSLDITRDQEINYPSDRGLSESSELQTPRQQTNPTFVTDDISSSPQGRKFPIIIMKLAQISRKSNVATKEMTNGKSGRIKFSTNDPKDGRLLDNIESQIAKGTSSTNPFSQRFHSADKSNMKKTSKLMQASKVPQVINGEDTNNSSHTAETRSPRVQNKFGFEKCSPTNQSSESKSKRRQHKQSSESLSLSSTPKQKVCTLQQRNEGFSKIRCQKRNFKHQVDVISSNVDSNRSMDSHRDIEGTQADHSESNNIISIQQVTHMNQNTATKELSKESAMAMITVTSEQQSPVSVLDLQFYSEDPPSPIKKKTETSKDLDEALATPDNIRHALDLPLSFNNTKAKRV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02446 473 MobiDBLite consensus disorder prediction 62 83 - -
Aip05g02446 473 PANTHER LONGIFOLIA PROTEIN 1 471 - -
Aip05g02446 473 MobiDBLite consensus disorder prediction 225 243 - -
Aip05g02446 473 PANTHER LONGIFOLIA PROTEIN 1 471 IPR033334 GO:0051513
Aip05g02446 473 MobiDBLite consensus disorder prediction 250 283 - -
Aip05g02446 473 Coils Coil 117 137 - -
Aip05g02446 473 MobiDBLite consensus disorder prediction 141 172 - -
Aip05g02446 473 MobiDBLite consensus disorder prediction 196 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02446 Aip-Chr5 118018683 118020283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02446 52 445 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 29.398 1.50e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02446 - - aip:107640944 920.613