Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02441 ATGATGGATTGGAAGAAATTGAGCTCATACGCGAAATCGAAGTGGATATCCACGGTGGCGAGCACATGGATTCAGTGCAGCAGCGGATCACTCTACACTTTCTCAATCTATTCCCAAACCCTAAAGTCAACGCTGCACTACGATCAGTCAACTCTCACCACTGTGTCTGTCTGGAAGGACGTAGGGGTCAACGCCGGTGTCCTTTGCGGCCTTCTCTACGACTTCGCTGCGCGCCGAACAGCTAACGGGCCCTGGCTGATCCACTTATTGGGCTCGGCCCAATGCTTCTTGGGCTATTTCCTCATGTGGGCAGCGGTTGCGGGCGTTATCGCTCCGGTGCCCGTGCCTATCATGTGCCTATTCATGTACGTGACAGCCCAGGCTCAGGGATACTTCAACACTTCCAATGTTGTCACCGGCGTCCACAACTTCCCTGACTATAGGGGAACAATTGTGGGCATCATGAagGGATTTCTTGGTCTCAGTGGAGCAATACTAATTCAAGTGTATAGGACAATATTCAACAAGAAGCCTAAAGCATATCTTCTGATGCTAGCTCTCTTGCCGCCGATAAATACTTTGCTGCTTATGTGGTTTGTAAGAATCCACAACACCCGAGAGGGCGACGAAAGGAAATATCTAAACATGTTTTCTTCCATGGCTGTGGTTGTCGCTGCATATCTAATGACTGTTATAATCCTGGAGAACATCCTTAGAGTGCCATTAATTATCCACGTGCTCATGCTGATTTTGCTCATTGTGTTGCTAGCCTCACTTCTTTGTATCGCAATTCAAGCACATGAGGCGACCCTTGCCAATACCTCGGAAAATTTTCATGATGAGAGAACCCAACTAATTGTGGAGCAAGTGTCCTCAGAATCAGATACTAACAAACAGAGGACTCTGCAACTGGGAGGAAACTTGAACCTTTTGCAAGCAGCACAAACTCTCAACTTTTGGATTTTGTTTTTGTCTGTGGCATGTGCCATGGGATCAGGACTTGCAACTATTAATAATATCAGCCAGATAGGGGAATCCCTTGGTTACACCGTGCGCGAGACAGATTCCTTGGTTTCATTGTGGAGCATTTGGAACTTCGCTGGGCGTTTCGGAGGTGGTTATATCTCGGATCATTTCTTACACACAAGAGGATGGGCAAGACCTTTGTTTATGGTCATCACCTTAATGGTCATGAGCATTGGCCATTTGATTATTGCTTCTGGAATGCAGGGTGCTCTATATGTTGGTTCAGTTTTGGTGGGTATCTGTTATGGCTCTCAGTGGTCAATAATGCCCACAATCGCTTCTGAGATATTTGGTGTGGGAAATATGGGTAGCATATTCAACACCATTACAATAGCAAGTCCTGTGGGATCTTACATATTTTCAATGAGAGTTGTTGGGTATATATATGACAAAGAAGCATCAGAGGGAAACACGTGCATTGGAACTCATTGTTTTATGTTGTCTTTCCTTATAATGGCATCTGCCACTGTTTTGGGTTCTCTGGCAGCTCTTGGTTTGTTTTTCCGGACAAGAAACTTCTATGGTCAGGTTGCACATAGTAGAATTCAGAACATCCTGTAA 1587 0.4543 MMDWKKLSSYAKSKWISTVASTWIQCSSGSLYTFSIYSQTLKSTLHYDQSTLTTVSVWKDVGVNAGVLCGLLYDFAARRTANGPWLIHLLGSAQCFLGYFLMWAAVAGVIAPVPVPIMCLFMYVTAQAQGYFNTSNVVTGVHNFPDYRGTIVGIMKGFLGLSGAILIQVYRTIFNKKPKAYLLMLALLPPINTLLLMWFVRIHNTREGDERKYLNMFSSMAVVVAAYLMTVIILENILRVPLIIHVLMLILLIVLLASLLCIAIQAHEATLANTSENFHDERTQLIVEQVSSESDTNKQRTLQLGGNLNLLQAAQTLNFWILFLSVACAMGSGLATINNISQIGESLGYTVRETDSLVSLWSIWNFAGRFGGGYISDHFLHTRGWARPLFMVITLMVMSIGHLIIASGMQGALYVGSVLVGICYGSQWSIMPTIASEIFGVGNMGSIFNTITIASPVGSYIFSMRVVGYIYDKEASEGNTCIGTHCFMLSFLIMASATVLGSLAALGLFFRTRNFYGQVAHSRIQNIL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02441 528 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 526 - -
Aip05g02441 528 Pfam Major Facilitator Superfamily 322 512 IPR011701 GO:0022857|GO:0055085
Aip05g02441 528 Pfam Nodulin-like 14 264 IPR010658 -
Aip05g02441 528 Gene3D MFS general substrate transporter like domains 2 201 IPR036259 -
Aip05g02441 528 SUPERFAMILY MFS general substrate transporter 11 203 IPR036259 -
Aip05g02441 528 CDD MFS_Mch1p_like 13 501 - -
Aip05g02441 528 SUPERFAMILY MFS general substrate transporter 214 514 IPR036259 -
Aip05g02441 528 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 11 526 - -
Aip05g02441 528 Gene3D MFS general substrate transporter like domains 311 515 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02441 Aip-Chr5 117924442 117929913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02441 12 526 Nodulin-like Gene Family AT1G74780 55.075 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02441 - - gmx:100814668 763.837