Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02425 ATGGAAGTGACGAGCGGTTTGGCACTGCTCTTTCAGCAATTCAGCGCTCTCTTACGGAAGAACCTTCTGCTGTCATGGCGAAACAGGAAGGCGACGCTGCTTCAGGTTCTGTCACCACTCTTCTTCATGTTCCTCATCTTCGCCATTGACAAGGCAATTAAAGCTCAGTACTCGAACACAACTTACTACAAGAGCGTCCCTGAGCCTCCGCTTCGCCCTTCACCTTCCATCCCTCCATGCGAGAACAAGTTCTTCGTCAAACTCCCTTGCTATGATTTTGTATGGAGCGGTGATCGCAACCCTAGAATTCGGACCATTGTTGAAGCTATCATGAACAATAACCCTGGAAGGACTATACCTCCCTCTAAGGTGAAATCCTTTAGTGATAAAGCTGCAGTGGACGAGTGGCTTTTGAACAACCCTATGCACTGTCCAGGGGCTTTGCATTTTGTGGAAAGAAGTAAAACTATCATCAGCTATGGTTTACAGACAAATTCCACATATGTTCAAAAGAGAGGCAAATATGAAGACCCCACTTTTGCATTTCAACTTCCGCTTCAGCTTGCTGCAGAGCGAGAAATAGCTAGGAACCTGATTGGAGACTCGAACTTCAGCTGGAATGTCTTTTTGAGGGAGTTTGCACACCCAGCCACGGCACCTTTCTCAACAGTGAGTTCCGTAGGTCCAACATTTTTCCTTGCGATTGCCATGTTCAATTTTGTGCTTCAGATGAGTTCTTTGGTTACAGAAAAAGAGCTTAAACTTCGCCAGGCAATGACTATGATGGGACTTTATGATTCTGCTTACTGGTTGTCCTGGCTCATCTGGGAGGCATTCATTACTCTCCTGTCATCCCTTCTCGTAGTTCTCTTTGGAATGATGTTTCAGTTTCGTTTCTTCTTGAAAAACGATTTTCTGGTCGTGTTCTTTGTGTTCTTCCTATTTGAACTCAGTATGCTTTTGCTTGTGCTATCTGCTTTCATTAGTAAATCCTCTTCAGCGACAACAGTAGGCTTCTCCATATTTATTGTTGGCTTTGTGACTCAGCTTGTTACACAAGCAGGATTTCCTTATTCAGATAGCATTTCCAAGACTTTCCGAATAATTTGGTCTTTCTTTCCGCCCAATCCCTTTGCTCAAGCTCTATATATTCTTTCTGAGGCGGTCTCAACTTCTGAAGTTCATGGTATTCGATGGAGTAAACGGGGACAATGTGGTCCTGACGATGAAGACTGTGTGATTACAATTAATGACATTTATCAATGGCTCTTAGCTACATTCGTTTTGTGGTTTGTTCTGGCCATCTACTTCGACAACATAATCCCCAATGCATCTGGTGTGAGGAAATCGATGTTATACTTTCTAAATCCGAATTATTGGATGGGAAGAGGAGGCCAAAATGTGAAAGAGGGTGGGGTTTGTAGTTGCTGCATAGTTTCAGTGCCTCGTCAAGAGCATGTTACACCAGATGATCAAGATGTCCTTGAAGAACAAAATACTGTCAAAAGACAAATAACAGAAGGTGTGGTTGATGCAAATGTTGCTGTTCAGATACGTGGCCTTGCAAAGACATATCCTGGTGCTTGTAATATTGGTTGCTGCTGTAAATGTAAAAGAACTAAACCTTACAATGCCGTTAAGGATTTATGGGTGAACTTTGAAAGGGATCAACTATTTTGTCTTTTAGGACCTAATGGAGCGGGTAAAACTACGGTTATTAATTGTTTGACAGGGATAACTCCAGCAACTGATGGAGATGCATTGATTTATGGACATTCCATCCGTAGCTCCACTGGCATGTCAAATATTCAAAAGCTTATAGGAGTATGTCCCCAGTTTGATATCTTGTGGGATGCACTGTCCGGCGAAGAGCATCTTCAACTCTTTGCTACTATCAAGGGCCTAACCCCAAGTTCCATCAACTCAATTACCCAAACATCACTGGCAGAGGTGAGACTCACTGATTCGGCAAAAGTGAGAGCGGGAAGTTACAGTGGAGGAATGAAACGTCGACTCAGTGTTGCAATTTCCCTTATTGGTGACCCTAAATTGGTTGTTTTGGATGAACCAACTACTGGTATGGATCCAATAACAAGGAGGCACGTATGGGACATAATTGAGAATGCTAAAAGAGGTCGTGCCATTGTCCTTACCACACACTCTATGGAAGAAGCTGACATTCTCAGTGACCGAATAGGAATCATGGCAAAGGGAAAGCTTCGCTGCATTGGCACCGCAATCAGATTGAAGTCACGCTTTGGAACTGGTTTCATTGCTAATATCAGCTTCTATGGAAACAATGTTGAAAGTCGTACAGACAATAGGGATGCTGTTTCTACGGTACATCAGGAGGCTGTGAAGCAATTCTTTAAGAATCATTTAGATGTAGTGCCAAAGGAAGAGAACAACAACTTCATCACTTTTGTGATTCCTCATGACAAAGAGGGGCTCCTGACAAATTTTTTCGCGGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGACATTCAGCTTGGTCTGACAACTCTAGAAGAAGTTTTCCTGAATATTGCAAAGCAAGCAGAGCTAGAAAGCGCTGCTGCTGATGGGACCCTAGTAACTTTGACCTTAACATCTGGGGAGTCTCTGCAGATTCCTATAGGAGCTAGATTTGTTGGAATTCCAGAAACAGAGTCTGAAGAGTACCCAACAGGGGTTATGGTAGAAGTATACTGGGAGCAAGATGAATCTGGTGCTCTATGTATCTCTGGTCACTCACAAAAAGTTCCAGTTCCTTCTGGTGTTCGACTATCATCATCTGCTTCGGCAAGACACCGTAGAAATTCGCGCCGACCAGGATCAGTTCACGGGGTTATAATTGATCCTAGCCAAGTTAGTTCAGTCAGGTTTCAATGA 2898 0.4331 MEVTSGLALLFQQFSALLRKNLLLSWRNRKATLLQVLSPLFFMFLIFAIDKAIKAQYSNTTYYKSVPEPPLRPSPSIPPCENKFFVKLPCYDFVWSGDRNPRIRTIVEAIMNNNPGRTIPPSKVKSFSDKAAVDEWLLNNPMHCPGALHFVERSKTIISYGLQTNSTYVQKRGKYEDPTFAFQLPLQLAAEREIARNLIGDSNFSWNVFLREFAHPATAPFSTVSSVGPTFFLAIAMFNFVLQMSSLVTEKELKLRQAMTMMGLYDSAYWLSWLIWEAFITLLSSLLVVLFGMMFQFRFFLKNDFLVVFFVFFLFELSMLLLVLSAFISKSSSATTVGFSIFIVGFVTQLVTQAGFPYSDSISKTFRIIWSFFPPNPFAQALYILSEAVSTSEVHGIRWSKRGQCGPDDEDCVITINDIYQWLLATFVLWFVLAIYFDNIIPNASGVRKSMLYFLNPNYWMGRGGQNVKEGGVCSCCIVSVPRQEHVTPDDQDVLEEQNTVKRQITEGVVDANVAVQIRGLAKTYPGACNIGCCCKCKRTKPYNAVKDLWVNFERDQLFCLLGPNGAGKTTVINCLTGITPATDGDALIYGHSIRSSTGMSNIQKLIGVCPQFDILWDALSGEEHLQLFATIKGLTPSSINSITQTSLAEVRLTDSAKVRAGSYSGGMKRRLSVAISLIGDPKLVVLDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGKLRCIGTAIRLKSRFGTGFIANISFYGNNVESRTDNRDAVSTVHQEAVKQFFKNHLDVVPKEENNNFITFVIPHDKEGLLTNFFAELQDREEEFGISDIQLGLTTLEEVFLNIAKQAELESAAADGTLVTLTLTSGESLQIPIGARFVGIPETESEEYPTGVMVEVYWEQDESGALCISGHSQKVPVPSGVRLSSSASARHRRNSRRPGSVHGVIIDPSQVSSVRFQ 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02425 965 Gene3D - 505 794 IPR027417 -
Aip05g02425 965 SMART AAA_5 555 739 IPR003593 -
Aip05g02425 965 Pfam ABC transporter 547 691 IPR003439 GO:0005524
Aip05g02425 965 ProSitePatterns ABC transporters family signature. 664 678 IPR017871 GO:0005524
Aip05g02425 965 MobiDBLite consensus disorder prediction 926 952 - -
Aip05g02425 965 PANTHER ABC TRANSPORTER A FAMILY MEMBER 1-RELATED 7 932 - -
Aip05g02425 965 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 516 762 IPR003439 GO:0005524
Aip05g02425 965 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 7 932 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aip05g02425 965 CDD ABC_subfamily_A 516 750 - -
Aip05g02425 965 Pfam ABC-2 family transporter protein 30 436 - -
Aip05g02425 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 538 744 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02425 Aip-Chr5 116930928 116936764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02425 494 761 Calmodulin-binding Proteins AT2G36910 18.978 2.43e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02425 - - gmx:100786538 1528.07