Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02404 atggagCTTCGAGACTCTCTCATTCTCTGTCACTCACAATCCATAACCCTAATAACCCCTCACGCTCCACCTTCCACATCCCTATCTCAATCTCCACCTCCCGCAAACCTTAATCCCAATCCGACTCTGCTCTCCGCGCCACCGCCCCCACTGCTGTTGCAGCAGCATCATCCCACCTTCTCCTACGTGCCGCCTCAGGTCTCCACTGGACCTTCCTTCGCGCCTCCCGCCGCCCCCTCCTTTCGGCCGCTGTCTCCTCAGGCACCGCACTTCTCCCCGCTGCCAAATCCATCCGGAGGCGCCGCTCCGCCCAGCCTTGCCTCCCAAAATCTGTTGATTCCACCTCCTGGTGTTAGCTCTGCGGCTGCAATGGCTCATGCCGTCGCTTCTGCTGCCGGTGGCGTTGCTGTTCCAGCGTCTGTGCCGTACATGCAGCCAATGATGTCGTATCAGGCTCCCCCGACGTCTTCTCCTCCCTCGCTGCCCTCCGCTCTGGCCAGTACCGCACTGGATTTGGCGCCATCCTCTCCGCTGAGGCAAGAGTGGGAATCTTCCACAGATCTTGAGGAGCAGAAGGAATTAGTTGCGGTGCACGTTGACTCCGACGCCAAGGTTTTGGGATCTATGAACGATGAGAAGCGCAGTTCTGGATTTTCGGGAGCTTATGGATTGTCAGTGGTGCTCACCACAAGCTTCTGCTTTGCATACCTTCATTTAGTAATGGAAAAAGAACCTCCCAAAACCGAGCAAATACCTGTGGTTGTCATGGCATTTGTTATGAGCGTGTTTTGGATATCTACCACAGCTGGAGAACTGGCAAATGGTGGATTTATTATGAGTGCTAGCCATAATTCTGGAGGGCCGAAATATGATTGGGGTGATAAAAAGGATTCAGTGACATCAAGTCAAACCCTAGATTTGACATCTGGTTTTGAAGTTGGCCCAACAACAAATAGTGCACGCGATGCGGTATCATGTCATAGTGCTCGGTCGGTGTTGACTATTGCCTTCCAGTTTCCTTTTGACAGTAGTCTACAGGATAATGTTACTGTCATGGAACGCCAGTACATCCATAGTGTGATTTCCTCTGTGCAGAGGGTTGCCATGGCGATTTCTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCCTGGTTCTCCAGAGGCTCTTACACTAGCCAACTGGATCTGCTGCAGTTATAGTTATTATTTGGGGGCAGAGTTGCTGAGATCTGATTCTCTCATTAGTGAGTCAGTGCTTAAACATTTGTGGCATCATCAGGATGCCATTTTGTGCTGTTCTTTGAAGTCGGTGCCGGTGTTCATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTAAAAGACATCACATGGGCTGCAGAGGCTTGGATTGATGTTGAAAGAGTTCATACAATTGCATTAGGAGCCAAGAAGAACTAG 1464 0.5075 MELRDSLILCHSQSITLITPHAPPSTSLSQSPPPANLNPNPTLLSAPPPPLLLQQHHPTFSYVPPQVSTGPSFAPPAAPSFRPLSPQAPHFSPLPNPSGGAAPPSLASQNLLIPPPGVSSAAAMAHAVASAAGGVAVPASVPYMQPMMSYQAPPTSSPPSLPSALASTALDLAPSSPLRQEWESSTDLEEQKELVAVHVDSDAKVLGSMNDEKRSSGFSGAYGLSVVLTTSFCFAYLHLVMEKEPPKTEQIPVVVMAFVMSVFWISTTAGELANGGFIMSASHNSGGPKYDWGDKKDSVTSSQTLDLTSGFEVGPTTNSARDAVSCHSARSVLTIAFQFPFDSSLQDNVTVMERQYIHSVISSVQRVAMAISPSGINPAVGSKLSPGSPEALTLANWICCSYSYYLGAELLRSDSLISESVLKHLWHHQDAILCCSLKSVPVFIFANQAGLDMLETTLVALKDITWAAEAWIDVERVHTIALGAKKN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02404 487 MobiDBLite consensus disorder prediction 26 42 - -
Aip05g02404 487 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 293 466 IPR044830 GO:0003700
Aip05g02404 487 MobiDBLite consensus disorder prediction 20 42 - -
Aip05g02404 487 MobiDBLite consensus disorder prediction 64 108 - -
Aip05g02404 487 Pfam MEKHLA domain 393 468 IPR013978 -
Aip05g02404 487 MobiDBLite consensus disorder prediction 69 100 - -
Aip05g02404 487 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 293 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02404 Aip-Chr5 115578795 115583177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02404 293 465 Homeobox Transcription Factor Family AT5G60690 68.750 1.32e-65 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02404 K09338 - aip:107640931 347.821