Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02395 ATGCATAGAGTATCGATTGTTTTTAATTTAAAATCGACAAATGTGCCGTCGATTTTTATCATTAAAAAACACTTACCCCCGTCGACTTCCCGCGTCCAGAGAATTCAGAAACACAATTTCCTTTTACCCAAAATTCCCCATTTCAGCACCATCCCGCGTCATTCTCCGCTGCCGTCGCCACTCCATCACGGTTGCTTCACCGGCGCTCCTCAACACACACTCTCTCTCAACCATAAACCCTACTCCAACGCCTTACTCAAAGCAAGGGTTTTCGGCGAGCTCGTGCTTATCCAATGGCCTGGTGAGGGGCTGTTAAGGTGTGGAAAGAGCTGCAGATTAAGGTGGATAAATTATCTGAGGCCTGATATCAAGAGAGGGAATTTCACCATTGAAGAAGAAGAAACCATCATCAAGCTTCATGAAATGCTTGGCAACAGGTCATCAGCGACTGCTATCGAGCAGGATGATACGTATGTTGCCAGCAGCCGGTCTTCCGTTGTAGCTTGTAGCCAAAAGTGTAGCCGTATCACCAGGAGTGTAGTCACAACTGTCTTGAGTTTGTAG 564 0.4663 MHRVSIVFNLKSTNVPSIFIIKKHLPPSTSRVQRIQKHNFLLPKIPHFSTIPRHSPLPSPLHHGCFTGAPQHTLSLNHKPYSNALLKARVFGELVLIQWPGEGLLRCGKSCRLRWINYLRPDIKRGNFTIEEEETIIKLHEMLGNRSSATAIEQDDTYVASSRSSVVACSQKCSRITRSVVTTVLSL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02395 187 Gene3D - 48 124 - -
Aip05g02395 187 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 120 146 IPR017930 -
Aip05g02395 187 SUPERFAMILY Homeodomain-like 106 147 IPR009057 -
Aip05g02395 187 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 103 154 - -
Aip05g02395 187 PANTHER TRANSCRIPTION FACTOR MYB14 103 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02395 Aip-Chr5 115216668 115221049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02395 103 151 MYB Transcription Factor Family AT2G31180 85.714 7.76e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02395 K09422 - gmx:100807569 99.3673