Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02384 ATGAATCCAAAGTTCGAAGCATGTGAACCCAAAACTTGTGGTGGCACCACTAATCACCAAAACGTAAGCTTTCCCTTCTACATCATATCAAAACAAAACTCCTACTGTGGTCTCCCCAATTTCGGACTCACCTGCTCCCACGACGGCTTCCCAATCCTCAACACCTCAGAAACTCTATACACTGTCCAAAACATTTTCTACAACAACCAATCACTTCGAGTGTCCATCCCTGGCCTCTCGGGACCAAGATCCACGGAATGTATTGCCCCACTGAGAAACATCAGCGGCCACAGCAAAAGGTTCAGTGTTGCTTCGAAGCAGAAGCAAGTGTTGCTGTTCTATGGCTGCAAGAACATGCAAGAGCACAGTATTGGGTGTTCAGCTGAAAACAGAACGGGATCGGTTGTGGCGCTTTATTGGGATGATGTCGAGAATTTGAAGTTAGCGAAGAAGAATTGCAGGGGGACGGTGAGCGTAACGAGGGTGGAAGATGAGAAAAGAGGGGTTGAAGAGGAGCTGAGAAGAGGGTTTTTGATGAATTGGACGGCCAAGAATTGCAGTGAGTGTTCCAACAGTGGTGGAAGGTGTGGGTTCGATCAAGACCACTATGCTTTCAGGTGTTACTGTCGTGATAGAATTGATTCAGAGAATTGTTATCCACAACCAGGTTTGTCCATATTGCTCTCTCGGATTATTGTGAATTATTAA 708 0.4605 MNPKFEACEPKTCGGTTNHQNVSFPFYIISKQNSYCGLPNFGLTCSHDGFPILNTSETLYTVQNIFYNNQSLRVSIPGLSGPRSTECIAPLRNISGHSKRFSVASKQKQVLLFYGCKNMQEHSIGCSAENRTGSVVALYWDDVENLKLAKKNCRGTVSVTRVEDEKRGVEEELRRGFLMNWTAKNCSECSNSGGRCGFDQDHYAFRCYCRDRIDSENCYPQPGLSILLSRIIVNY 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02384 235 Pfam Wall-associated receptor kinase galacturonan-binding 8 75 IPR025287 GO:0030247
Aip05g02384 235 PANTHER OS01G0690200 PROTEIN 2 220 - -
Aip05g02384 235 PANTHER WALL-ASSOCIATED RECEPTOR KINASE GALACTURONAN-BINDING PROTEIN 2 220 - -
Aip05g02384 235 Pfam Wall-associated receptor kinase C-terminal 145 211 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02384 Aip-Chr5 114715517 114716224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02384 6 198 C3H Transcription Factor Family AT2G46495 25.123 1.72e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02384 - - ahf:112803863 420.239