Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02381 ATGTATGGAATGGGTGCTGACCACCACGGTTTTCTTGTTTTCTTTATTCTCCTATGCTCTTTTGGGCTTCTTCACTCAGATCCAAATGAGAACAAAGAATATCAAGTGAACTGCCCGGGGTCCAAGGATTTCGACTGCGGAAATCTCCGGCTTTCGTACCCTTTCACCAACACTAATCTCTCAGAATGTGGCCTGCAGATAAGTAATTGTGATAACCGAGAAGAATGTCCTGAAGTTTTACTTGGAAACCAAACATACAAAATTGAAAGTACATTTATGGAGGATAATTTAGCTGGTTTAATTTCCGTCCAAGAGACCGGTGCCGCTGTAAACTTATGGGAGCTCCGTGGGGACTTGTCTCTTCGGGTTGTAAACCGTGTTGCCTTCTTCAAATGCATTGATGAGCATCCTCCTCCTCACGATGACATATTCCACTATAAAAGCTGTCCTCTTAAACATTATGATGTGTATTTCGGTTCGGATCATTTCTTTCCTTCAAATCATACATATGTTGTTGCCATGTTCCCTAGCTTGTTAAACGCATGTTCAGGTGATACGAGTGCACAGGAGCCCAATGTCACTCACCGGTGTATATCCTTCAAGTCTTTTGCTATAATTGAAGTAACATCTGCACATCATGACACATATTGGCCAATGATTCCAGCAAAGGGAAAGACAGGGGCCTCCAAGGCAGCAATAATAATAGGTTTATCTACTGGATTGGCTGCTGTGATTATAATTGCTTCCTGTCAGTTATGTGCCATTCTTTTACTGTACAAACGGAGGCACAATTCTTCAGGCTACGGAGGCAAATTAAGGAACATGTATTCTAGGCCAAACTCAAACACAAACCCAGAAAGTGGAAATGTCTACTTCGGAATCCCACTATTCTCCCACGAAGAGCTCCAACACGCAACTAACAATTTTGACCAAACTAAAGAACTTGGAGAAGGTGGCTTTGGAACTGTTTACTATGGAAAGCTTAGAGATGGACGAGAAGTTGCAGTGAAACGCCTATTCGAGCGTAACTACAAGCCAGTTGAATCATTCATCAACGAGATTCAGATCCTCACACGCTTGCGCCATAGGAATCTCGTATCCCTCTATGGCTGCACTTCACGTCATTCTCGTGAGCTACTCCTTGTGTATGAATACATCCCTAATGGAACTCTCAGTTATCATCTCCGCGGTGACACAACAAAGTCAAGCACATTGACCTGGCCGGTGAGAATGAAAATCGCCATTGAAACTGCTTGTGCATTGGCTTATCTCCATGCTTGCGGTATCATTCACCGTGACGTGAAAACCAGCAACATTCTCCTTGACAACAACTTCGGTGTTAAGGTTGCTGATTTTGGGCTTTCTAGATTGTTCCCCAGTGATGTCACACATGTCTCCACGGCGCCACGTGGAACCCCTGGTTATGTTGACCCGGACTACCGTCTGTGCTACCAGCTTACAAACAAGAGTGATGTGTACAGTTTCGGAGTGGTTCTTGTTGAGTTAATATCGTCGCTTCCGGCTGTTGATATGAACAGGGAAAGGGATGATGTTAAGTTGGCGAATGTAGCTGTAAGGAAGTTTCAAAAGGGAGCGTTTTGTGAATTGGTGGATCCTTCTCTTGGAATTCAGTCAGACTATGATTCAAGAAGGATGATAATTTCGGTGGCCAAATTGGCTTTTCAGTGTTTGCAGGGAGACAAGGACATAATCACTAAATATTTTTAA 1728 0.4346 MYGMGADHHGFLVFFILLCSFGLLHSDPNENKEYQVNCPGSKDFDCGNLRLSYPFTNTNLSECGLQISNCDNREECPEVLLGNQTYKIESTFMEDNLAGLISVQETGAAVNLWELRGDLSLRVVNRVAFFKCIDEHPPPHDDIFHYKSCPLKHYDVYFGSDHFFPSNHTYVVAMFPSLLNACSGDTSAQEPNVTHRCISFKSFAIIEVTSAHHDTYWPMIPAKGKTGASKAAIIIGLSTGLAAVIIIASCQLCAILLLYKRRHNSSGYGGKLRNMYSRPNSNTNPESGNVYFGIPLFSHEELQHATNNFDQTKELGEGGFGTVYYGKLRDGREVAVKRLFERNYKPVESFINEIQILTRLRHRNLVSLYGCTSRHSRELLLVYEYIPNGTLSYHLRGDTTKSSTLTWPVRMKIAIETACALAYLHACGIIHRDVKTSNILLDNNFGVKVADFGLSRLFPSDVTHVSTAPRGTPGYVDPDYRLCYQLTNKSDVYSFGVVLVELISSLPAVDMNRERDDVKLANVAVRKFQKGAFCELVDPSLGIQSDYDSRRMIISVAKLAFQCLQGDKDIITKYF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02381 575 Gene3D Phosphorylase Kinase; domain 1 282 385 - -
Aip05g02381 575 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Aip05g02381 575 Gene3D Transferase(Phosphotransferase) domain 1 386 570 - -
Aip05g02381 575 SUPERFAMILY Protein kinase-like (PK-like) 290 565 IPR011009 -
Aip05g02381 575 ProSiteProfiles Protein kinase domain profile. 309 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02381 575 Pfam Protein kinase domain 310 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02381 575 SMART serkin_6 309 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02381 575 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 570 IPR044652 -
Aip05g02381 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Aip05g02381 575 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02381 Aip-Chr5 114663694 114667927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02381 40 570 Receptor kinase-like Gene Family AT1G25390 45.455 5.73e-137 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip05g02381 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02381 - - ahf:112802646 913.294