Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02376 ATGGAGGCTCAACTCCATGACCACACTAAACGACAAAATCCTCTAAAGCTTTTCGGCTTCGGTGTGGACCACGATGACGATGACCTTTCAACGCTCTTCGACGCCGTCTCCCCGTCCGTCTCACCTGAATCCGATGGCAGAGCCGGAGGCGCGTCGGTGTTCCCTCCCTCGTCTTCCTCCTCCGGCGAAAGGAAGTACGAGTGCCAGTACTGCTGCCGCGAGTTCGCAAACTCGCAGGCTCTTGGAGGGCACCAGAACGCGCACAAGAAAGAGCGCCAACAGCTCAAGCGCGCGCAGCTCCAAGCAACGCGAAACGCCGCCGTTTCATTCGTTAGAAACCCGATCGTCTCCGCCTTCGTTCCGCCTCCTCACCTTCTTGCCCCGCCGGGGTCAGTTGTGGGCCAGTCGGGACCTCATCACCCATGGATCTACATGCCGCCACGTGCTGCGCCTCCTTCTTTCCACGTGTCCGTTTCTCACGGCTGCGTCTTCCCCAACAGCAATAGCAACGGAAATTTTAGTAGCTGTAACGGTAGTGGTGGAGGTGGGAATTATAGCGCTATAACGGGTGCAGGGGTGTTGCCTTACGCTGGTGGAGTAGGGGAATCCTCGCCCCCATCTGCCAAGATGGGCTCGCAAGTACAAGCCCGGGCCCACTATGTTAGGATTGATGGGCCTTGTTTGGATAGGTTATCGTCCAAAGGGGATAGAGGTACAAATTTGGATGATGGGTTAGGGTTGGACTTGGTCTTGGCCCACCTTGATGCCTTGGCCCGATTCGTAACGAATTAG 792 0.5669 MEAQLHDHTKRQNPLKLFGFGVDHDDDDLSTLFDAVSPSVSPESDGRAGGASVFPPSSSSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIVSAFVPPPHLLAPPGSVVGQSGPHHPWIYMPPRAAPPSFHVSVSHGCVFPNSNSNGNFSSCNGSGGGGNYSAITGAGVLPYAGGVGESSPPSAKMGSQVQARAHYVRIDGPCLDRLSSKGDRGTNLDDGLGLDLVLAHLDALARFVTN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02376 263 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Aip05g02376 263 Gene3D Classic Zinc Finger 51 113 - -
Aip05g02376 263 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Aip05g02376 263 SUPERFAMILY beta-beta-alpha zinc fingers 62 93 IPR036236 -
Aip05g02376 263 MobiDBLite consensus disorder prediction 36 63 - -
Aip05g02376 263 PANTHER ZINC FINGER PROTEIN 5 6 251 IPR044299 GO:0010090
Aip05g02376 263 PANTHER ZINC FINGER PROTEIN GIS3 6 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02376 Aip-Chr5 114326822 114327761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02376 15 252 C2H2 Transcription Factor Family AT1G68360 44.488 4.38e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02376 - - gmx:102663095 249.98