Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02355 ATGGAGAATGATGGCAAAGAGTCGGATAAGGATGGTGATCAATCTGAGGATTTAAGTGTTGAGTATGAGTGCAATTCCAATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGCAAAGGCAGATATAATCAATGCTGATGGGGATGAAACGTTGATAACTGATTTGACCATTGAAGACATATGGGGACTGGTGTTTGATACAGAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCAAGTGCTATGGATTTGTGTTCCGAAAAGACTTGAAGATGATGGATGCTAATGGCAACATTAATACAAGACAGTTGGTTTGCAATAAAGCAGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCGCAAAGGGAGCATAGGTGTCTTTGAGAGTGAACACAATCATCCACTGTGTCCACCTAAGTACATACATCTTATTGCTGCAAATCGTGGGCTTGATGAGGCTGATAAAACACAAGCAGACAACTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTCCCAAAAAGGTGGATATGATAAAGTGGGTTTTACCAGCAGAGACTTACATAACCACATTAGTAAGACTAGGCGTGGCAAAGTGAAAGACGGTGATGCATTTGCTGCGTTGGCCTATCTGTTTTCTAAGGCAGACAGTGACCTGTTATTTCTAGGAAAGTTCACCTTAAAGGTGTTTACCGTACAAATATTTGAACGGAGATGGAATGAGATCATATCCAAATACGGACTTGCCGAGAATGAATGGGTCCAGGGCATTTATAATGACAGAATGAAGTGGGCTACCGCATATTTGAGGGAGCACTTCTTTGGCCGCATAAGAACTACATCACAGTGTGAGGGAATTCATTCATTATTGAAGAACTATGTTGACAGTAAAACCAGTCTCCTTGAATTCATGCATAAATTTAGTGAAGTACTAAGGCATTACCGAAACAACCATCTTACTGCTGACTTTGAAACCTTTTATAAGTTTCCTATTTTGACTACGTGCTTGGAAAGTTTTGAGAAACAAGCTGCTGAACTTTATACAAGAAATATTTTCAAACTTGTGAAAGATGAGATAGAAGTAGCAGGTGCCTTAAATGTGACTGAATGCCCAAACAGTGGAGACATTGTTGAGTACAACACGAGTGAGTATTTTAATCAGTAA 1191 0.3938 MENDGKESDKDGDQSEDLSVEYECNSNESDDMVDVTVDEAKADIINADGDETLITDLTIEDIWGLVFDTESQVCEFYAKYAKCYGFVFRKDLKMMDANGNINTRQLVCNKAGERHWKHLKRDNRKGSIGVFESEHNHPLCPPKYIHLIAANRGLDEADKTQADNLRACGVKTCHIMGYMVSQKGGYDKVGFTSRDLHNHISKTRRGKVKDGDAFAALAYLFSKADSDLLFLGKFTLKVFTVQIFERRWNEIISKYGLAENEWVQGIYNDRMKWATAYLREHFFGRIRTTSQCEGIHSLLKNYVDSKTSLLEFMHKFSEVLRHYRNNHLTADFETFYKFPILTTCLESFEKQAAELYTRNIFKLVKDEIEVAGALNVTECPNSGDIVEYNTSEYFNQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02355 396 Pfam FAR1 DNA-binding domain 75 120 IPR004330 -
Aip05g02355 396 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 244 389 IPR031052 GO:0006355
Aip05g02355 396 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 223 IPR031052 GO:0006355
Aip05g02355 396 MobiDBLite consensus disorder prediction 1 20 - -
Aip05g02355 396 PANTHER OS03G0181600 PROTEIN 244 389 - -
Aip05g02355 396 PANTHER OS03G0181600 PROTEIN 64 223 - -
Aip05g02355 396 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02355 Aip-Chr5 113464694 113466370 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02355 FAR1 2.1e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02355 - - aip:110269479 409.068