Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02351 ATGGAGAACAGAAAAAAGGATCACAAGCCAATCACACGTGTAATGTGTCAAGCAAAGATTAGATTTCACTATGACTTGATTTTACAAAAGTGGCGGGTCACCAAATTTGAAGAGACTCACAACCATGACCTCAGCCCACCTAAGTATATCCAGTTTGTTCCGGCATATCGAACAATGACCGACGCTGATAAAGCACAGGCTGATAGTTTGTACTTTTATGGTGTTAGAACTTGTCATATAATGGGGTTCATGGTGGCACAAAAAGGAGATGAGGATCCACTATTGCAAGGAAAGTTTACTTTGAAGGATGGTAAGCTTGATAATTTAGTGTGGGTCGATGGATCTAGCATTACTGATTACCAATGTTTTGGTGATGTGTTAGCTTTCGACACGATATACCAAAAAAATAAGTATAATAGGCCGTTGGTTGTCTTCTTAGGAACAAATCATCATGGACAAACATGCATTTTTGGTTGTGATTTATTATCCGATGAGAAACGAGAAACCTATGTTTTGGTGTTGAATATGTTCATGGAGATAATGGGTAATAAACAACCTATAGCCGTGGTGACAGATGGAGATCTTGCAATGAGGGAGGCAATAAAAGAAGTTCTTCCAAATGCTGCACACCGTCTTTGTGCATGGCATCTATACCGTAATGCCTGTGAAGCTATAAAGAATTCAAAATTCTTAGATGGGTTAAAGCACCTAATGTATGGAAATTTTTTTTCTGAAGAGTTTGAGAGAAGATGGCATAACTTGATATCTGAGTATAGACTTTCTGAGAATGAATGA 795 0.3811 MENRKKDHKPITRVMCQAKIRFHYDLILQKWRVTKFEETHNHDLSPPKYIQFVPAYRTMTDADKAQADSLYFYGVRTCHIMGFMVAQKGDEDPLLQGKFTLKDGKLDNLVWVDGSSITDYQCFGDVLAFDTIYQKNKYNRPLVVFLGTNHHGQTCIFGCDLLSDEKRETYVLVLNMFMEIMGNKQPIAVVTDGDLAMREAIKEVLPNAAHRLCAWHLYRNACEAIKNSKFLDGLKHLMYGNFFSEEFERRWHNLISEYRLSENE 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02351 264 Pfam FAR1 DNA-binding domain 3 45 IPR004330 -
Aip05g02351 264 Pfam MULE transposase domain 126 220 IPR018289 -
Aip05g02351 264 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 89 IPR031052 GO:0006355
Aip05g02351 264 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 102 263 IPR031052 GO:0006355
Aip05g02351 264 PANTHER OS02G0262500 PROTEIN 102 263 - -
Aip05g02351 264 PANTHER OS02G0262500 PROTEIN 9 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02351 Aip-Chr5 113308185 113309098 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02351 MULE 8.3e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02351 - - adu:107485383 488.034