Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02337 ATGTCCATAAACGAGGATGATGTGAATAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGACGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCATGCCAGTTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATAAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGGAATATGAGGTATCTCCATCTAGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCCGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGACTGTTATCTTCGGCTCTGGCCTACTATCCGACGAAACCACAAAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGTGATGGGTGGGAAAAGTCCAAAAGCAATAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATGGAAAAGACGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATTGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAGTTAATAGCTGACTATAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATTTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAAGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACGGGTGGAAGTCGATAGAGGTAAGAAGCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTTTGTGCCATGAAGTTCGAAAACATACATGAGTTTCCAGATTCGTTGATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGAAATGCATGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGAGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCCTGCAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGACATCAACGATCCATTTGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAAGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTTGAAGGTAACCATCGCGATCGATACCGCAATGCATCAGCCAAGGACTTAGGTTTTAGTCCAGAGAGGTTTGCTAATTCTTCGAGGTCGTTCTCAATTAAGTCCGAACACTACTTAGGACCTAATACCAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTTGAGCGGAGCCTCCATGAAAGCAGCGAATCCATTGACATCGCGTCGACGAATGGTGTTTTCAATAAAAATCTCTACTCGTTAACACAGCAGGTGAAGGAGTCACAGCAGGACAAGAGACATTCATTCACGAAATATGAATGCGTTAATGATGTCGTTGATGATAAATGTGACACACGACATGTGCAGATCGATGTCTGA 2031 0.4328 MSINEDDVNNDSDNDLGDDFDYQPNAEDDAEDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVIRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLHLDDRSREARSLTRTKCPAPLRVKLDYGCGRWKTVIFGSGLLSDETTKTYKWLLETFVEVMGGKSPKAIITDGDLAMRDAIKNGLIYDNNDQRDFDRRWAAILDKHNLVGSTWMEKTYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNCKNTLIDFMHNLDRALKEYRNNELIADYKSQCSEPVMITSLEVYERFASCYFTRNIFKEIRNEIQRARALNITVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKKLFSCSCKLFESRGIPCSHIFCAMKFENIHEFPDSLIYKRWTKNAKNEFISTEMHVNDDIERVLKFRVGALASNCNKLCDIACKDLADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEDINDPFVVKSKGAPSKKSSWRKKRACSNCHKYGHYYKRCPDLMQHSVEGNHRDRYRNASAKDLGFSPERFANSSRSFSIKSEHYLGPNTKPFKKGGTRKFTATGMRNRKGKDNTFVERSLHESSESIDIASTNGVFNKNLYSLTQQVKESQQDKRHSFTKYECVNDVVDDKCDTRHVQIDV 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02337 676 PANTHER OS01G0607050 PROTEIN 150 202 - -
Aip05g02337 676 Pfam MULE transposase domain 151 201 IPR018289 -
Aip05g02337 676 MobiDBLite consensus disorder prediction 1 42 - -
Aip05g02337 676 Pfam FAR1 DNA-binding domain 74 152 IPR004330 -
Aip05g02337 676 ProSiteProfiles Zinc finger CCHC-type profile. 521 536 IPR001878 GO:0003676|GO:0008270
Aip05g02337 676 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 150 202 IPR031052 GO:0006355
Aip05g02337 676 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 202 448 IPR031052 GO:0006355
Aip05g02337 676 PANTHER OS01G0607050 PROTEIN 202 448 - -
Aip05g02337 676 ProSiteProfiles Zinc finger SWIM-type profile. 369 405 IPR007527 GO:0008270
Aip05g02337 676 MobiDBLite consensus disorder prediction 1 39 - -
Aip05g02337 676 SUPERFAMILY Retrovirus zinc finger-like domains 507 539 IPR036875 GO:0003676|GO:0008270
Aip05g02337 676 SMART 26again6 380 407 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02337 Aip-Chr5 112706655 112710263 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02337 FAR1 4.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02337 - - aip:107640898 1352.04