Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02328 ATGCAAAGCTTCAAGACAGCTCAAACAAGCTCCCAACTGTATTGTCATTCTCCCTTCTTGCTTCGGGGAGACAATAACACCAACCGGAACCCAACGCGTTTCTCTGATCTTGGCGAGATTCAACATTCTGCACCTGTGTTTCATCATGAAGATGCTGTTGATTTAAGCTCAAGCTCAATGTTTAACATGAAGTCCAACAATGTAGCTGTTTCTGTTGCTGGCACTAACTTGCAGTATGGGACGTTGACCACGACGAACCTTGGGAGTGCAGAGGTTGGTGGTTCAAGTGGGGGTGGGTGCCTGGATACAGGGATAAACATGTACCAGCAAAAAGGGATGGCTATGCCAAACATGCCTTTAGGAAATGGTCATGTTGAGAATTGGGCTGATTCAGGCATGGCTGACAACAGCCAACAGACTGATGATACTTCCACAGATATTGATATCGATGACAGAAATCAATGCAATAGAGTTCAGCATGGGGCACCCACGGTTGTGGACTCGAAGGATGAGACAAAGATCAAAGCTGTTGACCAGAAGACTATGCGGAGGCTTGCTCAAAATCGAGAGGCAGCAAGGAAAAGTCGGTTAAGAAAAAAGGCATATGTACAGCAGCTGGAGAACAGCCGAGCCAAACTCTTACAATTGGAGCAAGAGCTTCAGCGAGCACGTCAGCAGGGTATATTTATTGCAACTAACGGGGATCATACTCATTCATCTCTTGGAAATGGGGCCTTAGCATTTGATATGGAGTATGGCCGGTGGGTTGATGAGCATCAACATTTGCTAAATGACCTTAGATCAGCCTTAAATTCTCAAATGGGAGATAATGAACTGCATCTTCTTGTTGATGGTGTCATGGCACATTATGACGAATTATTTCGGTTAAAGAGCATAGGAGCAAAGGCTGATGTCTTTCACATGCTCTATGGGATGTGGAAGACACCTGCCGAAAGGTGGCTGATGTGGCTCGGCGGATTCCGGTCGTCTGAACTTCTCAAGATAGTTAAGAACCACCTCGAGCCCTTAACAGAACAGCAGTTGTTGGGGATTTGTAATCTTCAGCAGTCTTCTCATCAGGCAGAGGATGCTTTGAATCAAGGTATGGAGGCGTTGCAACAATCTCTTTCGGACACACTTTCCTCGGCCGCCCTAGGACCCACCGGTGCCGGAAATGTTGCCGATTATATGAGCCAAATGGCTATTGCAATGGGTAAGATTGCCAATCTGGAGAGTTTCCTTCATCAGGCTGATGTATTGAAGCAAGAAATGCTGCAGCAGTTGCAACGAATTTTGACCACACGACAAATTGCACGAGCCCTCCTTGTAATGAATGATTACATTTCAAGACTAAGAGCTCTCAACTCATTATGGTTAGCGCGCCCTAGAGAGTAG 1395 0.4609 MQSFKTAQTSSQLYCHSPFLLRGDNNTNRNPTRFSDLGEIQHSAPVFHHEDAVDLSSSSMFNMKSNNVAVSVAGTNLQYGTLTTTNLGSAEVGGSSGGGCLDTGINMYQQKGMAMPNMPLGNGHVENWADSGMADNSQQTDDTSTDIDIDDRNQCNRVQHGAPTVVDSKDETKIKAVDQKTMRRLAQNREAARKSRLRKKAYVQQLENSRAKLLQLEQELQRARQQGIFIATNGDHTHSSLGNGALAFDMEYGRWVDEHQHLLNDLRSALNSQMGDNELHLLVDGVMAHYDELFRLKSIGAKADVFHMLYGMWKTPAERWLMWLGGFRSSELLKIVKNHLEPLTEQQLLGICNLQQSSHQAEDALNQGMEALQQSLSDTLSSAALGPTGAGNVADYMSQMAIAMGKIANLESFLHQADVLKQEMLQQLQRILTTRQIARALLVMNDYISRLRALNSLWLARPRE 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02328 464 Gene3D - 179 228 - -
Aip05g02328 464 PANTHER TRANSCRIPTION FACTOR TGA9 39 464 - -
Aip05g02328 464 SUPERFAMILY Leucine zipper domain 180 223 IPR046347 GO:0003700|GO:0006355
Aip05g02328 464 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Aip05g02328 464 Coils Coil 199 226 - -
Aip05g02328 464 SMART brlzneu 176 239 IPR004827 GO:0003700|GO:0006355
Aip05g02328 464 CDD bZIP_HBP1b-like 180 232 - -
Aip05g02328 464 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 222 IPR004827 GO:0003700|GO:0006355
Aip05g02328 464 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 39 464 - -
Aip05g02328 464 Pfam bZIP transcription factor 180 218 IPR004827 GO:0003700|GO:0006355
Aip05g02328 464 Pfam Seed dormancy control 263 337 IPR025422 GO:0006351|GO:0043565
Aip05g02328 464 ProSiteProfiles DOG1 domain profile. 245 461 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02328 Aip-Chr5 112084538 112090853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02328 3 464 bZIP Transcription Factor Family AT1G68640 56.025 5.46e-167 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip05g02328 DOG1 1.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02328 K14431 - gmx:100797393 657.521