Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02319 ATGCCGGCGCTGCGAGAGAAAGAGCGCGACGGAGAAGGAGTCGGCGCCGAAGAAGAGTCAGAGAACATGGTTGTCGTCGAGGACCCAGGTTCTCTTCCTCCCCTTTCCCTCCCCTTTCCCCTCCGTCGCAATCGCACCCTCTTCCTCCCCCTTCCCCTCCGTCGCAATCGCACCCTCTTCCTCCCCTTTCCCTCTGACCCAATCGCACCGTCTCTTCTTATCTCCACCACCGACAACGACTGGAACCTTCACACTGAGCTAACTTCTTCTCCCACCCCACTCAGTGCTAACGAGTCTGTTCAGGCGGATGCAAGCACACAAACAGCCTCACCTCTGACGACGTCGGTTTGCCGGGATGAAGATACCACTGGGGGCGTGCGTGTCGCCGATGAACCAGAAATGTCTGACGAAGCAGAGCACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGTAGGGATGGAGTCGGACGAGTACGACTTTCAGGAAGATGAAACAGAACACAACCATCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGATTTGGAAGACAGTTTGGACGGCGCCGTAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACGCTGTTGATTCCGTGGAGTCGTTAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTCTCCGATTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGGGCGAGACGTTCCAGAAGCGAAAAACGTGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCTGAGACACGTTGTGGATGCCCTGCAAGGATGCTACTCCACATGGACGATGAATCAGGACGTTGGCACGTTGCGTACTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTAGCATCTCCCGAATCCACGATTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGCGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGACAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGATGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAACGTTTACCTTTCACCTCTTGTAATATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCACTGCACTGGGGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGATGACAGGCAAATGAAGTctgcgatcgagcaagtttttccagaggctcaccatcgactctgcgcttggcatctACTCCAAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACactacaagaaaaaaggcgtatttgtaacaaaaaatattgttacaaaacgtcgatattttga 1713 0.4874 MPALREKERDGEGVGAEEESENMVVVEDPGSLPPLSLPFPLRRNRTLFLPLPLRRNRTLFLPFPSDPIAPSLLISTTDNDWNLHTELTSSPTPLSANESVQADASTQTASPLTTSVCRDEDTTGGVRVADEPEMSDEAEHGVGSFEGEGSVGMESDEYDFQEDETEHNHHAEADVDNGDAVDLEDSLDGAVGMSDNYAEDEFYAVDSVESLGWIDFLNLSEEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGYRSPKFYSMPNRQKRPRAETRCGCPARMLLHMDDESGRWHVAYFSDAHNHHVLELRFSSMLPGHRRMSEADIEQMNDMRKGGISISRIHDFMASLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLRYLRECKTNDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVAFDATYKKNVYLSPLVIFSGVNHHNQTVVFATALGADEKEETYVWLLQQLQTSMKGKAPVSIITDDDRQMKSAIEQVFPEAHHRLCAWHLLQNATSNIGKPKFTLQEKRRICNKKYCYKTSIF 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02319 570 PANTHER OS02G0262500 PROTEIN 224 543 - -
Aip05g02319 570 MobiDBLite consensus disorder prediction 123 143 - -
Aip05g02319 570 Pfam FAR1 DNA-binding domain 237 326 IPR004330 -
Aip05g02319 570 MobiDBLite consensus disorder prediction 84 181 - -
Aip05g02319 570 MobiDBLite consensus disorder prediction 1 31 - -
Aip05g02319 570 MobiDBLite consensus disorder prediction 162 177 - -
Aip05g02319 570 MobiDBLite consensus disorder prediction 1 16 - -
Aip05g02319 570 Pfam MULE transposase domain 446 540 IPR018289 -
Aip05g02319 570 MobiDBLite consensus disorder prediction 84 120 - -
Aip05g02319 570 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 224 543 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02319 Aip-Chr5 111831265 111834404 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02319 MULE 2.8e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02319 - - ahf:112770447 800.045