Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02310 ATGCAATTCTCTGAGAAAATCCAACCCCAGAAGATGGGGTTTCGCGAGTACATCGAAGCATTGGAGGACGAGAGAAGAAAAATCCAAGTCTTCCACAGAGAGCTTCCCCTGTCCTTAGAACTTGTCGCGCAAGCAATTGAAGCCTGTAGGCAGCAGTTATCTGGAACAACGACAGAGTACAATTTGAATGGCCAATCGGAGTGTTCGGAGCAGACATCAACGGACGATCCTGTTTTTGAGGAGTTCATTCCAATCAAGAAAAGGGCTTCACCTGATTGCGATGAAGAAGATGATGAAGAATATTATGATGATGGTGAAGAGCAACATTCTCATAGAAACAAGATTCAAAAGGAGGATAGTACCAACAACAATAATAATAACAGCAGCTGCAGCACTGATAAGAAAAAATCTGACTGGCTCAGATCTGTTCAATTGTGGAACCCTGATCCCCAACCACCTAAAGAGGATGTGCCTAGAAAAGCGTCTGTTGTGGAAGTGAAGAGAAGCATTGGTGGTGCTTTTCAGCCATTTCACAGAGAGGAGAGCACTGTTGGAAAGGTTAATGCATCATCATCATCATTGCCAACTGCCAAAACGCCTTCTTCTCCGCCGGTGCCAGCAACAAGTTCCACAGGACCTGTATCGACCGGAGGCAATGCTGGAAGCGGCGGTAAAAGAGAGGAGAAAGGACAGGGTCAGAGGAAGCAGCGGCGGTGCTGGTCACAGGAACTACACAAACGGTTCCTTCATGCCCTTCAGCAGCTTGGAGGTGCAGATTCTGCCACCCCAAAACAGATAAGGGAGCTAATGAAGGTTGATGGCCTTACAAATGATGAAGTCAAAAGTCACTTACAGGTTAGTAATTTGTATACTAAACTACTCTTTGGTCATTTCTAA 897 0.456 MQFSEKIQPQKMGFREYIEALEDERRKIQVFHRELPLSLELVAQAIEACRQQLSGTTTEYNLNGQSECSEQTSTDDPVFEEFIPIKKRASPDCDEEDDEEYYDDGEEQHSHRNKIQKEDSTNNNNNNSSCSTDKKKSDWLRSVQLWNPDPQPPKEDVPRKASVVEVKRSIGGAFQPFHREESTVGKVNASSSSLPTAKTPSSPPVPATSSTGPVSTGGNAGSGGKREEKGQGQRKQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQVSNLYTKLLFGHF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02310 298 MobiDBLite consensus disorder prediction 88 136 - -
Aip05g02310 298 MobiDBLite consensus disorder prediction 119 133 - -
Aip05g02310 298 MobiDBLite consensus disorder prediction 184 218 - -
Aip05g02310 298 MobiDBLite consensus disorder prediction 174 239 - -
Aip05g02310 298 Gene3D - 234 291 - -
Aip05g02310 298 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 235 286 IPR006447 GO:0003677
Aip05g02310 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 232 292 IPR017930 -
Aip05g02310 298 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 292 - -
Aip05g02310 298 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 292 IPR044787 GO:0003700|GO:0006355
Aip05g02310 298 SUPERFAMILY Homeodomain-like 233 291 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02310 Aip-Chr5 111586005 111588158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02310 16 295 G2-like Transcription Factor Family AT1G25550 52.448 6.58e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip05g02310 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02310 - - adu:107491291 515.383