Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02308 ATGTCAAGACTCAATCTCATCGAGCTCGATCTGAAGCCATCGCCTGGTGCCGCCGCCGTCGCCGTTCCTCCCAACAGCCACGGCGTCATGCTCGCTCACTTCGCCTTCATCACGTTGGAGATTCGAGCAGCCCCTTCCGTCGTGAACTCATTCGTGGAAATTGCAGCCACCGCCACCACTGCTTGCTGTCGCGCTTTGTGTTCCCCCCGGCGCCAGGCCTGTTCGATCCTTCCACCCCAGCCGCTGGCTCTGTCGCAGCGAGATGAAACAAAGAGGGGTAAAAAGAAGCTAGAAGCTAGAAGCAACGACACGTGCTGGGAGCTGGTGGTTTTCTGTGTAGCCAAAGATCTGGGGGGGCAGTCCAAGGTTGACGGTTCCGGCGAGAACGTGAGAAGCTGCAAGGGAGGTCGCACCCTGGGAAGCACATTAGGCCGTAATCGTGGTGTAGTTGTGCAGATGGAGGCTAAAGTAGATGATGGAGTTAACCGAGGTGCTGGAATTCAAGAGGATCGTAGTGGCGGAACACAGTACGAAACAAACGAGACACCGATTGGAGACGGTAGAACTGATAGTTGTGATGAATGGGTGGAGGGAGAAGCCACTGAATATCGAGACGTGCTAATGCTGACCGAAGCCGATATGATTAGGAAGGTGTTCTGCACAGACGAAGCCGCGTATGAGTTTTACAAGAGATACGGCAAATGCCATGGGCTGAGGCAGTGCAAACATTACGAGAGGCTTGACAGGAAGAAGGACCACAGATCGGAGACGCGCACAAACTGTGACGCAAAGCTTTCAATCTTATGGGATGATGTCAGCGAAATTTGGAGGGTTAGAAAAGTTATACTAGATCACAACCATGATTTAACTCCTATGAGGATGGTTCATATGATCAACAGCTTTAGAGACATGGATTGTTCAGCTAAGGCACAGATTAATGGCATGCAGGGACATGGTGTCCCCACGTCGAAGATCCTAGGTTATATGGCAGGGCAAACTGGGGGGTATTCTCTGCTGGGTTTCACGAAAAAGGATGCCTATAACTACATCGAGAAGACTAAGCGGGAGAAGATTGTTGATGGAGACGCTAACACCACAATAATTTATTTAGAGGGAAAAGCAGTGTCGGATCCGATGTGCATGGCTAGGTACAATTTGACGGACAAAAATATGTTAGCGAACTTGTTTTGGGCTAATGGTGGGAGTCGGGTTGATTACCAACACTTTGGTGATGTGCTTTCCTTCGATTCGACTTACAAGAAAAACAAATACAGGAGACCTTTGGTTATCTTTTCTGGCTCGAACAATCATAAGCAAACAAGCATATTTGGATTTGGTTTGGTGTTGGATGAAAGCATTGGGTCATACACGTGGTTGCTTGAAAATTTCTTGGAGGTAATGTGCAACAAAAAGCCATCGGTGATTGTGACAGACGGGTGTGACTCAATGAGGGCAGCAATCAGGGCAGTGTTTCCGGAGGCCACACATAGGCTGTGTGCTTGGAATTTGGAGAAGAACGTGACTTCGAATGTGAAGGATGAAGGCTTAAGACAACTTTTCACTAGGTGGCTGTACTCAAATATGGAGATAGAAGAGTTTGAGGCAGAGTGGGACGCAGCTGTGGTTGAATACCGACTTCATGATAGTTACTGGGCTAAGGAAACCTATGATAAGCGGAAAATGTGGGAAAATGCATACCTAAAAGACAAATTCTGTGCCGGGTTCCGCACTACTTCTCAATGTGAAGGGATTAATGCAAATATCAAAAAGTTTCTTAATTCAAGGCACAGTCTTCTTGAGTTGGTGCAGAATGTTGAGTTGATGGTACGAGAATATCGGAATAACGAGTTAGAGGCCCACTTCAAGTCCATTAACGGCAACTCAGTGATAACGACTTGCTTGGACCCACTCGAGCAGTTTGCTGCCGATGTTTACACACGAGAGTTATTCTTGGACGTGAGGAGGGAAATTGTAGGTGTCGGTGCGGTTAACTTTGTCGCAAAGGTTCGCCGATCCACGACTATGGTGTACACAGTTGAAGACTATGGCATTCCAGGTAGGCCACTAACGTTACTCTATGATAGGGTTGGGAATAGGGTTCAATGTCCTTGCCAATTTTGGTTGCGAAACGGTTACCCATGTCGACACATGTTTTTCGTATTAAAGCATGAGCATGCGAGGGAAATTCCATCAAGGTTGGTGTTGACTAGGTGGCGTAAGGATGCTAAATCATTGAAGAACTACGGTGAAGGAAGAGCTGATGAGTGCAGTGAACGGGGGTTTCTGTTACGTCAGGGTGCACTGCACTCAGCATCGTAG 2319 0.4782 MSRLNLIELDLKPSPGAAAVAVPPNSHGVMLAHFAFITLEIRAAPSVVNSFVEIAATATTACCRALCSPRRQACSILPPQPLALSQRDETKRGKKKLEARSNDTCWELVVFCVAKDLGGQSKVDGSGENVRSCKGGRTLGSTLGRNRGVVVQMEAKVDDGVNRGAGIQEDRSGGTQYETNETPIGDGRTDSCDEWVEGEATEYRDVLMLTEADMIRKVFCTDEAAYEFYKRYGKCHGLRQCKHYERLDRKKDHRSETRTNCDAKLSILWDDVSEIWRVRKVILDHNHDLTPMRMVHMINSFRDMDCSAKAQINGMQGHGVPTSKILGYMAGQTGGYSLLGFTKKDAYNYIEKTKREKIVDGDANTTIIYLEGKAVSDPMCMARYNLTDKNMLANLFWANGGSRVDYQHFGDVLSFDSTYKKNKYRRPLVIFSGSNNHKQTSIFGFGLVLDESIGSYTWLLENFLEVMCNKKPSVIVTDGCDSMRAAIRAVFPEATHRLCAWNLEKNVTSNVKDEGLRQLFTRWLYSNMEIEEFEAEWDAAVVEYRLHDSYWAKETYDKRKMWENAYLKDKFCAGFRTTSQCEGINANIKKFLNSRHSLLELVQNVELMVREYRNNELEAHFKSINGNSVITTCLDPLEQFAADVYTRELFLDVRREIVGVGAVNFVAKVRRSTTMVYTVEDYGIPGRPLTLLYDRVGNRVQCPCQFWLRNGYPCRHMFFVLKHEHAREIPSRLVLTRWRKDAKSLKNYGEGRADECSERGFLLRQGALHSAS 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02308 772 Pfam FAR1 DNA-binding domain 236 290 IPR004330 -
Aip05g02308 772 PANTHER OS02G0262500 PROTEIN 254 749 - -
Aip05g02308 772 Pfam MULE transposase domain 412 506 IPR018289 -
Aip05g02308 772 MobiDBLite consensus disorder prediction 172 186 - -
Aip05g02308 772 MobiDBLite consensus disorder prediction 163 190 - -
Aip05g02308 772 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 254 749 IPR031052 GO:0006355
Aip05g02308 772 ProSiteProfiles Zinc finger SWIM-type profile. 687 725 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02308 Aip-Chr5 111469079 111474118 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02308 MULE 3.9e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02308 - - ahf:112758792 1199.5