Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02305 ATGCAAACTCATCATCACTCTTTCTCATCCTACATATCCTCTTGTGGGAGTAGTAGTACTACTAGTCCCTTCTTGGACAATCCCGAAGATGCCGATGTTGTGCTTCTTGATGACGAAGAAGCCTCCATTTCCCTTTCTCTTGGGCCTCCCGGCCAACATCACAACCCCAAGATCTCTACAACTTCACCACTACTACTGCAACATAACCCTAACTGTGATGATGACCAGAGTGGTGTAACCGTTGCTCTACACATTGGCCTTCCTTCCACAACAACAACAACTGCACCCAACACCACCACCACCATCAGCACCACAACAAGTAAAACTGATAGCCTTCAGGGTCAGTACTGGATCCCTTCCCCTGCACAAATCCTCATTGGTCCCACTCAGTTCTCTTGCACTGTCTGCAACAAAATGTTCAATCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCACAATATAGGAAAGGACCAGAATCATTAAGAGGAGCAAAGCCAGCATCTTCAATGCTGAGGCTACCATGCTATTGTTGCGCGGAAGGTTGCAAGAACAACATAGAGCACCCAAGATCAAGGCCTCTCAAGGATTTCAGGACACTGCAGACTCACTACAAGAGAAAGCATGGCGCCAAGCCCTTCGGCTGCCGCAAGTGCGGTAAGCCCTTCGCCGTCCGAGGAGATTGGAGGACGCACGAGAAGAATTGCGGCAAACTTTGGTTTTGCATATGTGGCTCCGATTTCAAGCACAAGAGATCCCTCAAGGACCATGTCCGCGCTTTCGGCGACGGCCATGCTCCTCATACTGTGGAGAGCTGTGACCAGTTCGTCGATGAAGAAGAAGATGATTATGAACTTGATGATGACGACGACCTAGACTTAGAAGATAATAACAACAATAATAGTAACGGCAATCAAGGTGTTTTCAGTTTCAATTAA 945 0.4762 MQTHHHSFSSYISSCGSSSTTSPFLDNPEDADVVLLDDEEASISLSLGPPGQHHNPKISTTSPLLLQHNPNCDDDQSGVTVALHIGLPSTTTTTAPNTTTTISTTTSKTDSLQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDQFVDEEEDDYELDDDDDLDLEDNNNNNSNGNQGVFSFN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02305 314 Gene3D Classic Zinc Finger 175 263 - -
Aip05g02305 314 PANTHER ZINC FINGER PROTEIN WIP6 2 303 - -
Aip05g02305 314 MobiDBLite consensus disorder prediction 299 314 - -
Aip05g02305 314 MobiDBLite consensus disorder prediction 1 26 - -
Aip05g02305 314 ProSitePatterns Zinc finger C2H2 type domain signature. 133 153 IPR013087 -
Aip05g02305 314 ProSiteProfiles Zinc finger C2H2 type domain profile. 131 158 IPR013087 -
Aip05g02305 314 PANTHER ZINC FINGER PROTEIN WIP2 2 303 IPR043584 GO:0003700|GO:0010468
Aip05g02305 314 SUPERFAMILY beta-beta-alpha zinc fingers 199 236 IPR036236 -
Aip05g02305 314 SUPERFAMILY beta-beta-alpha zinc fingers 124 153 IPR036236 -
Aip05g02305 314 MobiDBLite consensus disorder prediction 288 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02305 Aip-Chr5 111308080 111309389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02305 36 272 C2H2 Transcription Factor Family AT1G13290 71.545 2.71e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip05g02305 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02305 - - aprc:113870355 426.017