Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02302 ATGCATGGTTTCGCTGTGAGGTTGGATGAAGTCAAACGTGATAGCGATGGTTGCGTAATTATGTGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCAAAGTTGTTGCCGTGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCGTAAATGGAAGGTTGTTTCATTCTACGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACGTTAACATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAAGCGAAGAATTTGCACGACATAGGCAACAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGTCATTCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAAGGAAAAGGTGAAGGGTGGTGATGCAAATGCTGCAATAAGTTACCTGAGAGGTAAAGCTGGGAATGATTCGTATTTTTTTGGCAAGTACACATTAAGTAATGAGAATCGATTGGAAAATTTGTTTTGGGCTGATGGGACTATCCGTATTGATTATGAGTGCTTTGGGGATGTCTTGACATTTGATTCGACTTACAATAGAAACGTCTACAATAATCCACTTGTGATATTTTCTGGTAGCAATCATCATGGACATACCATCATATTTGGATGTGGTCTTCTTGTTAACGAGGATATTGATTTATACAAGTGGCTCTTGGAAATTTTTTTGGAAGCAATGGGTAATAAACACCCTATGGCAGTTGTCACTGACAGAGATCTTTCGATGAGAGAAGCCATTAAACAAGTCTTTCCTTATGCAACACATCGACTATGTGCATGGCACTTACATAGGAATGCATGCGAGAAGGTTAAGAACAGTGGATTTCTAAATGACTTCAAAAAATTGATTTATGATAATGTGAGTGTTGAACAGTTTGAGGTCATGTGGGGAGACATGGTGGCGAGGTATAACTTATCAAGCAGCTCTTGGGTCGACCAAACCTATGAGTTGAGGAATTTATGGGCTCTTGCATATTTGAGTAACCAATTTTTTGGGCGAATCAGGACAACATCCCAGTGTGAAGAGATTAACTCTCTAATAAAAGTATATGTAAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATCGAGACCGTTATTAGCCATTACAGGAACAATGAAAGAGTTGCAGAGTTCAATAGTAAATATACCGATCCAGTACTTGTGACTTCTTTGCCGACACTTGAAGGTTTTGCTGCGAAGACTTTTACTCGTAACATGTTCCGGGATGTTAGGAAGGAAATTGAGGGTGCTTGTGCTATGAACATAGAGTTGGTAATTCAGGATGGTGAAAAACTATACCTCAAGTGTAACAGTTTTAGAATGCCAGAGATTGATCATGTGGTTGAGTTTGACAGAGTTGGAGGGATGCTTCGTTGTGAGTGTTTGTGGTTCAAAAATCAAGGGATTCCCTGCATGCACATATTCGCATACCTAAAGCACCAACACGTTGAAGTTACTCCAGAACACTTAGTGTGCAAGCGATGGACGAAGAACGACAAGAGTGATTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATATGGTATTAAAGTGTCGTTTGGGTGTATTAGGTGTTGAGTGTTCTAGGTTGATGGATGTTGCATGTAAGAACTCAAGTGATTTTGTCGAAGCAATGAATGGTATTGTCAACACAATTACAAAACTCCAAAAGCGAGGTGAAAATCCATGCAACTGTAATTTAGACGATGACTACGTTATTGACCCATTGGTGGTGAAGAGTAAAGGAGCTCCCAAGAAATCAAAATTTAAGCAATAG 1887 0.4012 MHGFAVRLDEVKRDSDGCVIMCQIVCNRAGSRKEEVEKDERIRDHRPLTQSCCRARIRARLDRKIRKWKVVSFYEEHSHGLVDPLDVNMMPEYRTFSVSDKAQAKNLHDIGNRTCHILGYLAAQKGGYANLSFNQKDMYNLITQHRKEKVKGGDANAAISYLRGKAGNDSYFFGKYTLSNENRLENLFWADGTIRIDYECFGDVLTFDSTYNRNVYNNPLVIFSGSNHHGHTIIFGCGLLVNEDIDLYKWLLEIFLEAMGNKHPMAVVTDRDLSMREAIKQVFPYATHRLCAWHLHRNACEKVKNSGFLNDFKKLIYDNVSVEQFEVMWGDMVARYNLSSSSWVDQTYELRNLWALAYLSNQFFGRIRTTSQCEEINSLIKVYVRKKDTLLEFINNIETVISHYRNNERVAEFNSKYTDPVLVTSLPTLEGFAAKTFTRNMFRDVRKEIEGACAMNIELVIQDGEKLYLKCNSFRMPEIDHVVEFDRVGGMLRCECLWFKNQGIPCMHIFAYLKHQHVEVTPEHLVCKRWTKNDKSDFMKSNVDDPSDSDMVLKCRLGVLGVECSRLMDVACKNSSDFVEAMNGIVNTITKLQKRGENPCNCNLDDDYVIDPLVVKSKGAPKKSKFKQ 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02302 628 PANTHER OS02G0262500 PROTEIN 2 585 - -
Aip05g02302 628 Pfam FAR1 DNA-binding domain 2 82 IPR004330 -
Aip05g02302 628 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 585 IPR031052 GO:0006355
Aip05g02302 628 Pfam MULE transposase domain 204 298 IPR018289 -
Aip05g02302 628 ProSiteProfiles Zinc finger SWIM-type profile. 479 517 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02302 Aip-Chr5 111209649 111211535 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02302 MULE 2.1e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02302 - - aip:107641230 1119.38