Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02293 ATGGCAGGAGCATCATGGTTGAAAATTGCATATTACCAGTTTAAGCGTTGGTTCAAAGGACCGGTATTGCTTGATATTCATGTAACTCAAGAGTGGCCTGGCTTACCAAAAGGGGTTAAATTTGATCCGTCAGATCAAGAGATAATCTGGCACTTGCTTGTAAAAGCTGGTGTAGGAAATTTAAAACCTCATCCTTTCATTGATGAGTTTATTACTACCCTTGAAGTGGATGATGGAATTTGTTATACTCATCCTCAACATTTACCTGGTGTCAAGCAAGACGGAAGGGCCTCACATTTCTTCCACAGAGCAATAAAGGCTTATAATACCGGCACTCGAAAGCGTCGAAAAGTACATGGTCAGGATGACGTTCGTTGGCACAAGACTGGAAGGACTAAACTGATCACCCTGAACGGGGTTCAAAAGGGTTGCAAAAAAATCATGGTTTTATATACAAATGCGGTGAGAGGAGGAAAGTCAGAGAAAACTAATTGGGTTATGCACCAATATCACCTTGGGACAGAAGAAGATGAAAAGGAAGGAGAATATGTTATTTCTAAAGTTTTTTATAAAGAAGACCAGGATATACCTGAAGCCGCAGAAAGTAAGAATGCAACAGTTGCGAAAGTAGATCCAGTCACTCCCAAATCCACGACTCCTGAGCCTCCTCGTAATGAAAGGCAAGATTCAGATCTAGGCCTGGATCTAGACCTAGGGCAAGAAGCACTTGCTTTTCCTGAGATGGATTGCTTAGATGAAATTCAAGCTGACTGTGAAGAATCTGCGAAAGCTAATCCACCAGTACTGGAGACACAAGAAAATGAAGGGATGGACAACAAGGAAACTAATGCTTATGAAGGACAACTGTGGTGGGATAGTGATTCACAGAATCTATTAGATTCACAACAACTCGTTGAAGCATTAACTCTCTGCGAAGATATATTTCACAGCCAATCTTCCAACAAAGACGATGAAAATGATAAGAACCAAACCGGTCTATCTGTGTATGCTCATCTAGGACCAGAGCATCTGAAGAAGGATATTGAGGAGTGTCAAAAGCTTGCTCCTGCAGGACCAGAGCATCAGAAGGATATTGAAGACGGCCAAAATCTTGACATCGACCTTGCAAATATAGAGCGGGATACTCCTCCTGAGCATCGACTAAGTCAGCTGGAATTTGGTTCGCAGGACAGCTATACTTACTGGGGTTTTCAAGGCGTAAACTAA 1227 0.4205 MAGASWLKIAYYQFKRWFKGPVLLDIHVTQEWPGLPKGVKFDPSDQEIIWHLLVKAGVGNLKPHPFIDEFITTLEVDDGICYTHPQHLPGVKQDGRASHFFHRAIKAYNTGTRKRRKVHGQDDVRWHKTGRTKLITLNGVQKGCKKIMVLYTNAVRGGKSEKTNWVMHQYHLGTEEDEKEGEYVISKVFYKEDQDIPEAAESKNATVAKVDPVTPKSTTPEPPRNERQDSDLGLDLDLGQEALAFPEMDCLDEIQADCEESAKANPPVLETQENEGMDNKETNAYEGQLWWDSDSQNLLDSQQLVEALTLCEDIFHSQSSNKDDENDKNQTGLSVYAHLGPEHLKKDIEECQKLAPAGPEHQKDIEDGQNLDIDLANIERDTPPEHRLSQLEFGSQDSYTYWGFQGVN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02293 408 Pfam No apical meristem (NAM) protein 36 172 IPR003441 GO:0003677|GO:0006355
Aip05g02293 408 ProSiteProfiles NAC domain profile. 35 191 IPR003441 GO:0003677|GO:0006355
Aip05g02293 408 MobiDBLite consensus disorder prediction 199 232 - -
Aip05g02293 408 Gene3D NAC domain 44 196 IPR036093 GO:0003677|GO:0006355
Aip05g02293 408 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 27 403 IPR044799 GO:0003700
Aip05g02293 408 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 27 403 - -
Aip05g02293 408 SUPERFAMILY NAC domain 26 191 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02293 Aip-Chr5 110046359 110050433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02293 30 191 NAC Transcription Factor Family AT4G28500 61.446 4.65e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip05g02293 NAM 4.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02293 - - adu:107491284 775.007