Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02277 ATGGCTTCACTACTGTCTCCCGCACTTGTCTTGTTTGCTGTAAGACTTTCAGGATTTGCAGTTGGACTCCTTGTTCTGTTCTGGGTCCTTGCCTTTAAATCCACCTTTCTCCCTTCTTCTCTTTCCCAACAAGACTTCATCTATGCTGTTCTTCATCCTTTGCTGATGGTCATTGGGTTTATTATCTTAAGTGGAGAAGCAATTTTGGTGCACAGATGGTTGCCTGGTTCTATGCGATTGAAAAAATCAGTGCATTTAGGGCTTCAAAGTGTGGCTCTAGCTTCTGGAGTATTTGGAATTTGGACTAAATTTCAGGGGAAGGATGGGATTGTGGCCAATTTCTATAGTCTTCATTCATGGATGGGTTTGATTTGCATTTCCCTCTTTGGAACTCAGAGAATAGAGAATAGAGAATAG 417 0.4173 MASLLSPALVLFAVRLSGFAVGLLVLFWVLAFKSTFLPSSLSQQDFIYAVLHPLLMVIGFIILSGEAILVHRWLPGSMRLKKSVHLGLQSVALASGVFGIWTKFQGKDGIVANFYSLHSWMGLICISLFGTQRIENRE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02277 138 ProSiteProfiles Cytochrome b561 domain profile. 13 138 IPR006593 -
Aip05g02277 138 PANTHER CYTOCHROME B561-RELATED 6 133 IPR043205 GO:0016491
Aip05g02277 138 Pfam Eukaryotic cytochrome b561 51 132 IPR006593 -
Aip05g02277 138 Gene3D - 2 134 - -
Aip05g02277 138 SMART 561_7 51 134 IPR006593 -
Aip05g02277 138 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02277 Aip-Chr5 107615562 107616599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02277 8 132 Chloroplast and Mitochondria Gene Families AT1G26100 62.400 5.14e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02277 K08360 - gmx:100527512 204.527