Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02272 ATGCTTGAGCACAATGTTGGTGGGTTTCGATTTGACCAGAGAGAGGTAGTCCATAGTTGCAACATTAATCCTTGTGTTCAGATAGTTTTATCAGCAAGACAAGCTTTGAGGGCGTTGAGGGCAGTGGTGAGGCTGCAGGCTATATTTTGCGGAAGGCTAGCGAGGAAGCAAGCTACTATTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGCGTCCGCGCTAGGAATGTGAGGAACTCTCCAGAAGGGAAAGCCGTGCAGACACTATTAGATCAGTACCGCAACCAAGCTGATCCTATCAAGGAGGCTGAGGAGTATGAGGGTGGTTGTTGTTCTGTCTTTGCTGAGGTTGATGGTGCACCTGTGTCACTTAATTAG 387 0.4832 MLEHNVGGFRFDQREVVHSCNINPCVQIVLSARQALRALRAVVRLQAIFCGRLARKQATITLRCMQALVRVQARVRARNVRNSPEGKAVQTLLDQYRNQADPIKEAEEYEGGCCSVFAEVDGAPVSLN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02272 128 ProSiteProfiles IQ motif profile. 40 67 IPR000048 GO:0005515
Aip05g02272 128 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 32 99 - -
Aip05g02272 128 PANTHER IQ-DOMAIN 5-RELATED 32 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02272 Aip-Chr5 106959066 106960129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02272 32 108 IQD Protein Family AT1G72670 62.338 7.47e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02272 - - aip:107640854 121.709