Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02265 ATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTAGTAGTGACATTCTTGTAAGGGCTAAAAATGGGACAGACAAAAAGCGAGAGTTGCTCATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTAGTAGTGACATTCTTGTAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTGTATTCCTGCATTGGAAAAAATTGACCAGAAACAATCTATCCTGGCAGAGTCCAAATTGTATTGCTCTCACGCCTATGGAACAATTTTGTTAATAGTGTCTATTTAG 363 0.3884 MGIYEKGFERPSPIQEESIPIALTSSDILVRAKNGTDKKRELLMGIYEKGFERPSPIQEESIPIALTSSDILVRAKNGTGKTAAFCIPALEKIDQKQSILAESKLYCSHAYGTILLIVSI 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02265 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 97 IPR027417 -
Aip05g02265 120 Gene3D - 39 119 IPR027417 -
Aip05g02265 120 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 38 - -
Aip05g02265 120 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 39 98 - -
Aip05g02265 120 Pfam DEAD/DEAH box helicase 56 95 IPR011545 GO:0003676|GO:0005524
Aip05g02265 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 36 IPR027417 -
Aip05g02265 120 Gene3D - 1 38 IPR027417 -
Aip05g02265 120 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 1 38 - -
Aip05g02265 120 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 39 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02265 Aip-Chr5 106546894 106547389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02265 39 94 Eukaryotic Initiation Factors Gene Family AT5G11200 46.429 2.46e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02265 K12614 - ahf:112735966 147.902