Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02259 ATGAGGAAGGGTACTAGAAAATTAAGAAAGCTACGTCTGAGCAAGATCTACACTTTCGCATGTGGTAAGAAATCATTACTGAATGAAGAACATTCTCGAATTGGAAGTCCTGGCTTTTCAAGGGTGGTTCTGTTGAATGAGCCTTCAGAGAGCTCTGAAAATGCTTCTGGGAACAACAATGACAACCACCACTATGCAGATAATGTTGTGAGATCCACAAAGTACACTGTTGCAAATTTCTTACCCAAGTCACTATTTGAGCAGTTTAGGAGAGTGGCAAATTTCTTTTTCTTGGTGACCGGTGTATTGTCCTTTACCAAGCTTGCGCCTTATACAGCTGTCAGTGCCATTCTGCCCTTGATTGTTGTCATTACTGCAACAATGGTCAAAGAGGGTATTGAAGATATGCGTCGCAAAAAGCAGGATATTGAGGTGAACAATAGAATAGTGGAAGTGCATAAAGGGGATGGAGTTTTTGAATGTACTGAGTGGAAGAACCTAAAGGTGGGTGACATAGTTAAGGTTGAAAAGGATGAGTTCTTCCCTGCAGACCTACTACTTCTTTCATCAAGTTATGAGGATGCAGTTTGTTATGTTGAGACCATGAACTTAGATGGAGAAACAAACTTGAAGTTGAAACAAGGCTTGGAAGTTACTTGCTCCTTAACGGAAGACAACTTGAGTGATTTCAGAGCTTCAATCAAATGTGAAGACCCCAATGCAAACTTGTATACATTTGTTGGAAGCATAGAGTTTAAGGAGCAAGTTTATGCACTTTCTCCCCAGCAGCTTCTCCTAAGAGATTCCAAACTGCGCAACACGGACTACATATTTGGAGCTGTCATCTTCACCGGTCATGACACAAAGGTTATCCAAAACTCGGTTTCTCCACCTTCCAAGAGAAGCAAGATCGAGAGGAAGATGGATCGGGTTATCTATTTCATGTTCTTAATCTTGTTCCTAATGGCATTTGTTGGATCAGTTTTCTTTGGCATTGAAACTAAACAAGACTTGAACAATAATGTGATGAAAAGATGGTATCTAAGGCCAGATGATTCTACAATTTTCTTTGATCCGAAAAGAGCACCTGCTGCTGCTTTCTTCCATTGTTTAACAGCCTTAATGTTATACAGCTTCTTTATTCCGATCTCATTGTATGTATCCATCGAAGTTGTTAAGGTCCTTCAGAGCATTTTCATAAACCAAGATATCCTAATGTATCATGAAGAAACAGACAAGCCGGCTCATGCCATCACTTCCAACTTGAATGAGGAACTCGGCCAAGTTCACACAATTCTTTCTGATAAAACTGGAACTCTCACTTGCAATTCAATGGAGTTCATCAAATGTTCTATTGCCGGAGTCGCTTATGGTCGTGGAGTCACAGAGGTCGAGAAGGCCATGAACAGAAGAAATGGATTGGAATTTGATGACTTAAGAAACTCTCCTGATAGAAAGGCACCAATCAAAGGTTTTAATTTTACAGATGAAAGGATCATGGATGGAAATTGGGTTAATGAGCCTCATGCAAATGTTATCCAGAATTTCTTTCGATTATTGGCAATTTGTCATACAGCTATACCAGAAATTAATGAAGACACAGGAAATATCTCTTATGAAGCTGAATCTCCAGATGAAGCAGCATTCGTCATTGCCGCCAAAGAACTTGGCTTTGAATTCTACAAAAGGACTCAGACTAGTTTATCAATCTTTGAGTTGGATCCTGTTTCTCAAGAAAAAGTTAAAAGGACATACATGCTTCTCCATGTTTTAGAATTCAATAGCACAAGAAAGCGAATGTCAGTCATAGTAAAAGATGAAAAGGGAAGAATTTTGCTACTTTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGACTTGCAAACAATGGAAGAAAGTTTGAAGAGAAAATCTTGGAACATGTACATGAGTATGCCGATGCAGGTTTGAGGACATTGATACTAGCGTTCCGTGAACTTGATGAAGAAGAATACAAGGAGTTTCATGATAAATTTACCGAAGCAAAAAATTCAGTTTCAGCAGATCGAGAAACAATGATTGAGGAAGTATCAGATAACATCGAGAGGAATATGATTCTACTTGGTGCCACTGCAATAGAGGACAAGCTCCAACACGGGGTTCCGAATTGCATTGACAAGCTTTCTCAAGCAGGAATTAAAATCTGGGTTTTGACAGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTACTTAGAGAAGGAATGACGCAAATCATAATTCATTTGGATACTCCAGAAATTCGATCACTAGAGAAGGTTGGAGATAAGAGAGAAATTTTCAAGGCTTCAAGAAAAAGTATTCACCGTCAACTATCACAAGGTGCTCAACAAATTGCAGCTGCTAGTGGAACCCCTGAGCAAGCATTTGCTCTAATTATTGATGGCAAATCACTTACTTATGCTTTAGAGGATGATATGAAGGACTTACTTCTGGATTTAGCAACTAAATGTGCATCTGTTATTTGTTGTCGCTCATCGCCAAAACAGAAAGCATTGGTGACCAGACTTGTAAAATCTAGAACCGGTAAAACTACGTTAGCTATTGGGGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCGGACATAGGGATTGGAATCAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCCAGTGATGTTGCAATTGCACAGTTTTGTTATTTGGAACGACTACTTCTTGTGCATGGACATTGGTGTTACCGAAGAATCTCATCAATGATATGTTATTTCTTTTACAAGAATATCACATTTGGCTTCACTTTATTCTTGTTTGAGGTCCATGCGTCGTTTTCTGGAGAACCTGCATATAATGATTGGTTTTTGTCTCTGTATAATGTCTTTTTTTCGTCACTTCCAGTCATTGCCCTTGGGGTCTTTGACCAGGATGTATCAGCCCGGTTTTGTTTGAGGTTTCCTATGTTATATCGAGAAGGTGTAGAAAACATCCTCTTTAGCTGGCGTCGAATACTTAGTTGGATGCTTAATGGATTTATTAGCTCCATACTAATTTTCTTCTTCTGCACAAAAGCTATGGAGATTCAAGCCTTTGATGAAGGAGGAAGAACGGCAGGAAGAGATATACTAGGAGCAACAATGTACACTTGTGTGGTTTGGGTAGTAAACCTGCAAATGGCACTTGCTGTAAATTACTTCACCCTGATTCAACATGTTTTAATATGGGGCTCCATTGTTATCTGGTATATCTTCCTCCTTGCCTATGGAGCAATGGCCTCATCGTTTTCTGGAAACGCTTACCATGTCTTTGTTGAAACTCTGGCTCCGACTCCATGCTATTGGCTGTTGATATTTTTTGTGGTAATCACAACTCTTGTACCATACTTCACTTTCTCAGCACTACAGATGCGATTCTTTCCCATGTATCATGAAATAGTGCAGTGGTTAAGGCACAAAGGAAAGACGAATGATCCCGAGTTTTGCGCTATGGTGCGGCAAAGTTCATTGAGGCCGACAACTGTTGGATCAACGGCACGCAGAGTGGCCAAGACTAACAGCCTTAGAGGCAGCTTCACTGACCATAGATGA 3597 0.3998 MRKGTRKLRKLRLSKIYTFACGKKSLLNEEHSRIGSPGFSRVVLLNEPSESSENASGNNNDNHHYADNVVRSTKYTVANFLPKSLFEQFRRVANFFFLVTGVLSFTKLAPYTAVSAILPLIVVITATMVKEGIEDMRRKKQDIEVNNRIVEVHKGDGVFECTEWKNLKVGDIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTCSLTEDNLSDFRASIKCEDPNANLYTFVGSIEFKEQVYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSVSPPSKRSKIERKMDRVIYFMFLILFLMAFVGSVFFGIETKQDLNNNVMKRWYLRPDDSTIFFDPKRAPAAAFFHCLTALMLYSFFIPISLYVSIEVVKVLQSIFINQDILMYHEETDKPAHAITSNLNEELGQVHTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMNRRNGLEFDDLRNSPDRKAPIKGFNFTDERIMDGNWVNEPHANVIQNFFRLLAICHTAIPEINEDTGNISYEAESPDEAAFVIAAKELGFEFYKRTQTSLSIFELDPVSQEKVKRTYMLLHVLEFNSTRKRMSVIVKDEKGRILLLCKGADSVMFERLANNGRKFEEKILEHVHEYADAGLRTLILAFRELDEEEYKEFHDKFTEAKNSVSADRETMIEEVSDNIERNMILLGATAIEDKLQHGVPNCIDKLSQAGIKIWVLTGDKMETAINIGFACSLLREGMTQIIIHLDTPEIRSLEKVGDKREIFKASRKSIHRQLSQGAQQIAAASGTPEQAFALIIDGKSLTYALEDDMKDLLLDLATKCASVICCRSSPKQKALVTRLVKSRTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFCYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLFEVHASFSGEPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARFCLRFPMLYREGVENILFSWRRILSWMLNGFISSILIFFFCTKAMEIQAFDEGGRTAGRDILGATMYTCVVWVVNLQMALAVNYFTLIQHVLIWGSIVIWYIFLLAYGAMASSFSGNAYHVFVETLAPTPCYWLLIFFVVITTLVPYFTFSALQMRFFPMYHEIVQWLRHKGKTNDPEFCAMVRQSSLRPTTVGSTARRVAKTNSLRGSFTDHR 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02259 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 64 1143 IPR023298 -
Aip05g02259 1198 Gene3D - 545 700 IPR023299 GO:0000166
Aip05g02259 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 704 IPR023299 GO:0000166
Aip05g02259 1198 Gene3D - 123 294 - -
Aip05g02259 1198 CDD P-type_ATPase_APLT_Dnf-like 67 1025 - -
Aip05g02259 1198 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 837 944 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip05g02259 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1191 - -
Aip05g02259 1198 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 1191 - -
Aip05g02259 1198 SUPERFAMILY HAD-like 421 909 IPR036412 -
Aip05g02259 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 893 1143 IPR032630 -
Aip05g02259 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 435 441 IPR018303 -
Aip05g02259 1198 SUPERFAMILY Calcium ATPase, transduction domain A 153 291 IPR008250 -
Aip05g02259 1198 SFLD Haloacid Dehalogenase 415 916 - -
Aip05g02259 1198 SFLD p-type atpase 415 916 IPR044492 -
Aip05g02259 1198 Pfam Cation transport ATPase (P-type) 538 625 - -
Aip05g02259 1198 Gene3D - 701 903 IPR023214 -
Aip05g02259 1198 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 65 1150 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aip05g02259 1198 PRINTS P-type cation-transporting ATPase superfamily signature 433 447 - -
Aip05g02259 1198 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Aip05g02259 1198 Pfam Phospholipid-translocating ATPase N-terminal 59 116 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02259 Aip-Chr5 106313185 106323440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02259 11 1193 Primary Pumps ATPases AT1G68710 70.188 0.0 1792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02259 K01530 - gmx:100785037 1928.68