Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02244 ATGTCAGCCGCGTCGCCTTCACCGGCAGCTNNNNNNNNNNNNNNNNNNNCATCCGTGCCGCCTCCGGCGAATTCCTCACCCCCAAGTCCCGCATCTGTGCCGCCGCCAAGATCATCGCCACCGCCGTCATCAAACCCTACTTCCCAAAATTCATCTCCTCCTTCGACTTCCACGTCTCCCCCAAGATCTGCACCTCCTCCTCCTCCTCCCACAACACCTAGCACTCAACCAGCTCCTTCAAATTTTCCACCTAGGTCATCATCATCCCCACCACCGCCAAATCAGTTGGCGCCGCCTCCGGCATCCATTCTTACTCCACCTGGAAACGGATCACAGACAGAGAATTCAGGTCCTACAGCTGGAGGAGGTGGTAATGGAATTGGTACCGCTGCAATAGTGGCTATCAGTGTAGCGGCGGGAATTCTGCTGTTTGGGATCATTGGAGTTGCAATTTGGTGCATGATGAAGAGGAAAAAGAAAAAGGTGCTGAGCAATGGTGGTTACGTCATGCCAACAACTCCTGCCTCATCTCCTGATTCAGATTCCTCATTCTATAAGACGCATTCTTCAGCTCCTCTTGTACAAAGCGGCTCTGGCAGTGATGTTTTGTATACACCATCTGATCCTGGTGGACTAGGCCACTCAAGGTCGTGGTTTTCGTATGAAGAATTAATCAAGGCCACAAATGGTTTCTCAACTGAAAATCTCTTAGGCGAAGGTGGATTTGGTTCCGTGTATAAAGGATACCTGCCGGATGGGAGAGAGATAGCGGTCAAACAGCTGAAAATTGGTGGTGGTCAGGGAGAGAAAGAATTCAAAGCTGAAGTCGAGATTATTAGTCGCATACATCATCGTCATCTGGTTTCACTGGTTGGATATTGTATTCAAGATACCAGAAGACTGCTTGTCTATGACTATGTCCCCAATAATACCCTTTATTTTCATCTACATGGGGATGGTAGGCCGGTGTTAGAGTGGGCAAACCGTGTTAAAATTGCAGCTGGTGCAGCTCGAGGGATAGCTTATCTCCATGAAGACTGTAATCCTCGGATTATTCACAGGGATATCAAGTCATCGAACATTCTTTTAGATTACAACTTCGAGGCTAAAGTTTCAGATTTTGGGCTAGCAAAATTAGCCCTAGATGCAAATACACATATAACCACACGAGTCATGGGAACTTTTGGGTACGTAGCCCCTGAATATGCATCCAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCCTTTGGGGTTGTGCTCTTGGAGCTCATTACTGGGCGGAAGCCAGTAGATACATCTCAACCCTTGGGAGATGAGAGTTTAGTTGAATGGGCTCGACCATTATTGAGTCATGTACTTGATAGTGGGGAGTTGGGGATTTTGACGGATCCAAGGCTAGAAAAGAACTATGTTGAAAGTGAAATTTTCTGTATGATAGAAGTTGCTGCATCTTGCGTTCGGCATTCAGCTGCAAAGAGGCCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGCTTCTGACCTAACGAATGGATTGCGAGTTGGAGAAAGCGAGGCTTTTAACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGCACCGATTTCTTTAGCAAGGGTAGTTCAAATACGTGA 1692 0.445 MSAASPSPAAXXXXXXXSVPPPANSSPPSPASVPPPRSSPPPSSNPTSQNSSPPSTSTSPPRSAPPPPPPTTPSTQPAPSNFPPRSSSSPPPPNQLAPPPASILTPPGNGSQTENSGPTAGGGGNGIGTAAIVAISVAAGILLFGIIGVAIWCMMKRKKKKVLSNGGYVMPTTPASSPDSDSSFYKTHSSAPLVQSGSGSDVLYTPSDPGGLGHSRSWFSYEELIKATNGFSTENLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEKEFKAEVEIISRIHHRHLVSLVGYCIQDTRRLLVYDYVPNNTLYFHLHGDGRPVLEWANRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLLSHVLDSGELGILTDPRLEKNYVESEIFCMIEVAASCVRHSAAKRPRMGQVVRAFDSLGASDLTNGLRVGESEAFNSXXXXXXXXXXXXXXXXXXXXXXXXXSTDFFSKGSSNT 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02244 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Aip05g02244 563 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 17 527 - -
Aip05g02244 563 Gene3D Phosphorylase Kinase; domain 1 211 306 - -
Aip05g02244 563 MobiDBLite consensus disorder prediction 58 105 - -
Aip05g02244 563 Pfam Protein kinase domain 232 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02244 563 PANTHER BNACNNG34790D PROTEIN 17 527 - -
Aip05g02244 563 SUPERFAMILY Protein kinase-like (PK-like) 213 502 IPR011009 -
Aip05g02244 563 ProSiteProfiles Protein kinase domain profile. 231 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02244 563 MobiDBLite consensus disorder prediction 21 48 - -
Aip05g02244 563 Gene3D Transferase(Phosphotransferase) domain 1 307 516 - -
Aip05g02244 563 SMART serkin_6 231 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02244 563 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Aip05g02244 563 CDD STKc_IRAK 237 507 - -
Aip05g02244 563 MobiDBLite consensus disorder prediction 1 127 - -
Aip05g02244 563 MobiDBLite consensus disorder prediction 106 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02244 Aip-Chr5 105962791 105967147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02244 115 526 Trihelix Transcription Factor Family AT5G38560 64.988 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aip05g02244 Pkinase 1.6e-44 CL0016