Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02239 ATGTCTCAGGTTAGGGTTGCTCTTATGATACTGATGGCTTACCTTTCATACATGCTTGTTGAGATATTTATATTCCTTTATGTTGGGATAGATGCACTGGATATAGAGAAGTGGCGATTCATAAGCCAAAGTCCTGGAAAATCAGTTGGGATCAGTTCAGTGCTTCTAGGACTTATCCTAGTTGGAAGAGCAACATTTGTTTTCCCTCTCTCATTCTTATCCAATTTGCTCCAGAAATCCCCACATGTGAAAATTGACATGAAGCAACAAGTCACAATTTGGTGGTCTGGTCTCATGCGAGGTGCTGTTTCTATAGCACTTGCTTACAACCAGGTTACTGTAGAACAACAATATCTCAGGTCAAATTCTGCCAGAGTTTGGAACCCTTCCAAAGCTTCAGACATTGGAACTTTCCAATAA 420 0.4048 MSQVRVALMILMAYLSYMLVEIFIFLYVGIDALDIEKWRFISQSPGKSVGISSVLLGLILVGRATFVFPLSFLSNLLQKSPHVKIDMKQQVTIWWSGLMRGAVSIALAYNQVTVEQQYLRSNSARVWNPSKASDIGTFQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02239 139 Pfam Sodium/hydrogen exchanger family 14 108 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip05g02239 139 PANTHER SODIUM/HYDROGEN EXCHANGER 3 21 116 - -
Aip05g02239 139 PANTHER SODIUM/HYDROGEN EXCHANGER 21 116 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02239 Aip-Chr5 105780847 105781846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02239 5 123 Antiporters AT3G05030 50.303 8.02e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02239 - - ahf:112742336 181.415