Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02223 ATGATAGGAAGTAGGCCAGAGAGAAAAAACACACTAGCGAGAAGTCACTCTCGCCGCCTCAGTCACTCTCCGGCAAAGTTGAGGGAGAAGTCACTTTCCATCAAACCCTTTGATGGAGGCATTCATCCCCTCATCGCTTTTCATCTCCTCGCTGTTGCAAGAAACACTATTGTTGCTGCCTTCATCGAGCTTCTATCTGGTTATCGATCTGTCTTCGATCTGAATATTTGTTGCTGCCGCTTAATTCTCCGCCATCGTTCATCTCCTTGTCGCTGCTCATCCCCTCGTGACACCTATCAACATCATGCCGCTGCCTTCAATGAGCTTCTACGATCTTGTTCTGGCTTCGATCTGAAGGTTAGCCATCGCCTATCATCTCCTTGCTACTTTGTTTATCACCTCGCCGCCGCAGGCAACATTGTTACTGCCATTAGCGAGCTTTTGCGATTTGGTGCCGCCTTCTCTGTCACTTTCGCGATTACGTCCTCGCTCTCACCATCGAGAACTTCCTTGAGCGCCACATTAGCAACTAAGAATATCAATAGGCCTAGCATGGTGGTGAATGTGAAGGTCTTGAAGAAGCTCTTCTCTGTTAACAACTATCAAAAGAAACCAAGAAGGAGAATGGATAGAGCCTGTGTGGTGGGTGATGCCATTGAATATAATAAGGGAGCTGCTCAGAACGGTCTTAACCAGAATTTGACACTGCAGCTATCATGTGGCTTTCCTGTGGGGAAATCTCCCGGTTCTCCTGGTGTTGCTGTGGTTGTCGAAAGAGTTAGGATACGCGGACTGTCAAGGTTTAGAAACCTGAGTAAATTCGCACACTCCATAAAAGTGAAGGTGTTGCCTGCAGATCCAAATATTCGCATTCCAAACATAGAGATCTGTTTCCATAGGAATGCATCTCTTGCTATAGGAATGTGCTCACAAGGCCAATGGGAAAAAGTTACCAAGGGTTCTTGGATTCGATCAATGTCTCTTTTTGACCACAAGCTCTTAGATATAAGGACTGCTAGCTCAACACTGGCATCCTCCTTAAGCAAATCGTTAGCATTTTATTATAGCAGTGCAATGACAATTGGGATCATTCTTGTGATACTTATGATTCTTTATCAGGTATTTGCTGCACCGTACAGCCTGAGGCTTCCTCGGATTGACAGGGTGAGATATGACAAAGCTTGGTACGAATGCCTTGATGTGCAACATTCTCCTCACAATATGGAGCAAGAAACAAAGATGTTGGAACAAGTTTCCGGAATGAAACTCACACAAGAGACCAAGAAACTAAGGCAGACTTGTTTTAAAGTTAATTACAAAAGGAGGAAACTTTTGGCCTCCAAATCTTATTCATCATCACTTAGCTAA 1368 0.4459 MIGSRPERKNTLARSHSRRLSHSPAKLREKSLSIKPFDGGIHPLIAFHLLAVARNTIVAAFIELLSGYRSVFDLNICCCRLILRHRSSPCRCSSPRDTYQHHAAAFNELLRSCSGFDLKVSHRLSSPCYFVYHLAAAGNIVTAISELLRFGAAFSVTFAITSSLSPSRTSLSATLATKNINRPSMVVNVKVLKKLFSVNNYQKKPRRRMDRACVVGDAIEYNKGAAQNGLNQNLTLQLSCGFPVGKSPGSPGVAVVVERVRIRGLSRFRNLSKFAHSIKVKVLPADPNIRIPNIEICFHRNASLAIGMCSQGQWEKVTKGSWIRSMSLFDHKLLDIRTASSTLASSLSKSLAFYYSSAMTIGIILVILMILYQVFAAPYSLRLPRIDRVRYDKAWYECLDVQHSPHNMEQETKMLEQVSGMKLTQETKKLRQTCFKVNYKRRKLLASKSYSSSLS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02223 455 Pfam NEMP family 343 375 IPR019358 -
Aip05g02223 455 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g02223 455 Gene3D - 366 418 IPR012340 -
Aip05g02223 455 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 342 374 - -
Aip05g02223 455 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 230 342 - -
Aip05g02223 455 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 342 374 - -
Aip05g02223 455 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 230 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02223 Aip-Chr5 103632158 103637222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02223 407 450 AtRKD Transcription Factor Family AT5G53040 50.000 1.18e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02223 - - ahf:112748261 229.565