Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02222 ATGCTAACTGTAACCAAGATTCCGAATCATGTAGCTATTAAAATTGCTCTTGAACTGAAGAAGCTCCTCATTGACAATAGTCTTCTATATGTCTCTCAGTCCAATTTGGAGGTCAACTTATTCAAGGTAATGGAGAGGCGGGGATATAGAGAAGAGTACATTAGTCATTATAAGATGATGACAAGGTTTCATCATCAAAGAGTTCCATTGGTAATCCTTGTTTGTGGCACTGCTTGTGTTGGAAAGTCTACTATTGCCACCCAGCTTGCGCAGAGGCTAAATTACCAAATGTGTTGCAGGTTTGTTATGAAAAATGGCGCCAAGGGATGCGAGGTCATCGTTAGTGGCAAGTTGAGGGCTCAGCGCGCTAAATCCATGAAGTTCAAGGACGGGTACATGATTTCCTCAGGGCAACCAGTCAAGAACTGCATTGATTCTGCTGTAAGACATGTACTCCTTAGGCAGGGATTTGGATAA 477 0.4256 MLTVTKIPNHVAIKIALELKKLLIDNSLLYVSQSNLEVNLFKVMERRGYREEYISHYKMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNYQMCCRFVMKNGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKNCIDSAVRHVLLRQGFG 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02222 158 Gene3D - 78 157 IPR036419 -
Aip05g02222 158 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 96 - -
Aip05g02222 158 SUPERFAMILY Ribosomal protein S3 C-terminal domain 84 157 IPR036419 -
Aip05g02222 158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 96 IPR027417 -
Aip05g02222 158 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 1 96 - -
Aip05g02222 158 Pfam Ribosomal protein S3, C-terminal domain 85 156 IPR001351 GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02222 Aip-Chr5 103622201 103627237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02222 100 156 Cytoplasmic Ribosomal Protein Gene Family AT3G53870 87.719 5.62e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02222 - - ahf:112750479 300.827